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authorJohannes Ranke <jranke@uni-bremen.de>2022-05-18 21:26:17 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2022-05-18 21:26:17 +0200
commit91c5db736a4d3f2290a0cc5698fb4e35ae7bda59 (patch)
tree8e9e34d18f055936172329c1248e6e2ff136bff9 /docs/articles/FOCUS_D.html
parentea57db98cef3fb882f7bd9656b44f270e7bded38 (diff)
Remove outdated comment in FOCUS L vignette, update docs
This also adds the first benchmark results obtained on my laptop system
Diffstat (limited to 'docs/articles/FOCUS_D.html')
-rw-r--r--docs/articles/FOCUS_D.html22
1 files changed, 11 insertions, 11 deletions
diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html
index 1363ef11..39cf7e1a 100644
--- a/docs/articles/FOCUS_D.html
+++ b/docs/articles/FOCUS_D.html
@@ -105,7 +105,7 @@
<h1 data-toc-skip>Example evaluation of FOCUS Example Dataset D</h1>
<h4 data-toc-skip class="author">Johannes Ranke</h4>
- <h4 data-toc-skip class="date">Last change 31 January 2019 (rebuilt 2022-03-07)</h4>
+ <h4 data-toc-skip class="date">Last change 31 January 2019 (rebuilt 2022-05-18)</h4>
<small class="dont-index">Source: <a href="https://github.com/jranke/mkin/blob/HEAD/vignettes/FOCUS_D.rmd" class="external-link"><code>vignettes/FOCUS_D.rmd</code></a></small>
<div class="hidden name"><code>FOCUS_D.rmd</code></div>
@@ -191,9 +191,9 @@
<div class="sourceCode" id="cb11"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span class="fu"><a href="https://rdrr.io/pkg/saemix/man/summary-methods.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">fit</span><span class="op">)</span></code></pre></div>
<pre><code><span class="co">## mkin version used for fitting: 1.1.0 </span>
-<span class="co">## R version used for fitting: 4.1.2 </span>
-<span class="co">## Date of fit: Mon Mar 7 13:15:58 2022 </span>
-<span class="co">## Date of summary: Mon Mar 7 13:15:59 2022 </span>
+<span class="co">## R version used for fitting: 4.2.0 </span>
+<span class="co">## Date of fit: Wed May 18 20:42:29 2022 </span>
+<span class="co">## Date of summary: Wed May 18 20:42:30 2022 </span>
<span class="co">## </span>
<span class="co">## Equations:</span>
<span class="co">## d_parent/dt = - k_parent * parent</span>
@@ -201,7 +201,7 @@
<span class="co">## </span>
<span class="co">## Model predictions using solution type analytical </span>
<span class="co">## </span>
-<span class="co">## Fitted using 401 model solutions performed in 0.165 s</span>
+<span class="co">## Fitted using 401 model solutions performed in 0.144 s</span>
<span class="co">## </span>
<span class="co">## Error model: Constant variance </span>
<span class="co">## </span>
@@ -244,11 +244,11 @@
<span class="co">## </span>
<span class="co">## Parameter correlation:</span>
<span class="co">## parent_0 log_k_parent log_k_m1 f_parent_qlogis sigma</span>
-<span class="co">## parent_0 1.000e+00 5.174e-01 -1.688e-01 -5.471e-01 -1.172e-06</span>
-<span class="co">## log_k_parent 5.174e-01 1.000e+00 -3.263e-01 -5.426e-01 -8.483e-07</span>
-<span class="co">## log_k_m1 -1.688e-01 -3.263e-01 1.000e+00 7.478e-01 8.205e-07</span>
-<span class="co">## f_parent_qlogis -5.471e-01 -5.426e-01 7.478e-01 1.000e+00 1.305e-06</span>
-<span class="co">## sigma -1.172e-06 -8.483e-07 8.205e-07 1.305e-06 1.000e+00</span>
+<span class="co">## parent_0 1.000e+00 5.174e-01 -1.688e-01 -5.471e-01 -1.174e-06</span>
+<span class="co">## log_k_parent 5.174e-01 1.000e+00 -3.263e-01 -5.426e-01 -8.492e-07</span>
+<span class="co">## log_k_m1 -1.688e-01 -3.263e-01 1.000e+00 7.478e-01 8.220e-07</span>
+<span class="co">## f_parent_qlogis -5.471e-01 -5.426e-01 7.478e-01 1.000e+00 1.307e-06</span>
+<span class="co">## sigma -1.174e-06 -8.492e-07 8.220e-07 1.307e-06 1.000e+00</span>
<span class="co">## </span>
<span class="co">## Backtransformed parameters:</span>
<span class="co">## Confidence intervals for internally transformed parameters are asymmetric.</span>
@@ -334,7 +334,7 @@
<div class="pkgdown">
<p></p>
-<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.2.</p>
+<p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.3.</p>
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