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authorJohannes Ranke <jranke@uni-bremen.de>2016-11-18 15:01:53 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2016-11-18 15:22:42 +0100
commitc6086d1dd97ad2d6420625de7b8009b1b0f85d06 (patch)
tree1a38fd690c94a556555ec71edff443bcfe609b7b /docs/articles/FOCUS_L.html
parent9a8dfa8bd52664929fd4197f3e9c4e65b62cad53 (diff)
Static documentation rebuilt by pkgdown::build_site(run_dont_run = TRUE)
Using branch 'jranke' on jranke/pkgdown, fixing issues hadley/pgkdown#178 and hadley/pkgdown#213 Remove plot=TRUE from mkinfit calls also in dontrun sections of examples to avoid a flood png files documenting the progress of the fit.
Diffstat (limited to 'docs/articles/FOCUS_L.html')
-rw-r--r--docs/articles/FOCUS_L.html44
1 files changed, 22 insertions, 22 deletions
diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html
index e7ec5308..c3009e4d 100644
--- a/docs/articles/FOCUS_L.html
+++ b/docs/articles/FOCUS_L.html
@@ -41,7 +41,7 @@
<h1>Example evaluation of FOCUS Laboratory Data L1 to L3</h1>
<h4 class="author">Johannes Ranke</h4>
- <h4 class="date">2016-11-17</h4>
+ <h4 class="date">2016-11-18</h4>
</div>
@@ -63,15 +63,15 @@ FOCUS_2006_L1_mkin &lt;-<span class="st"> </span><span class="kw"><a href="../re
<span class="kw">summary</span>(m.L1.SFO)</code></pre></div>
<pre><code>## mkin version: 0.9.44.9000
## R version: 3.3.2
-## Date of fit: Thu Nov 17 22:58:18 2016
-## Date of summary: Thu Nov 17 22:58:18 2016
+## Date of fit: Fri Nov 18 15:22:03 2016
+## Date of summary: Fri Nov 18 15:22:03 2016
##
## Equations:
## d_parent/dt = - k_parent_sink * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 37 model solutions performed in 0.103 s
+## Fitted with method Port using 37 model solutions performed in 0.09 s
##
## Weighting: none
##
@@ -156,8 +156,8 @@ FOCUS_2006_L1_mkin &lt;-<span class="st"> </span><span class="kw"><a href="../re
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="kw">summary</span>(m.L1.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</code></pre></div>
<pre><code>## mkin version: 0.9.44.9000
## R version: 3.3.2
-## Date of fit: Thu Nov 17 22:58:19 2016
-## Date of summary: Thu Nov 17 22:58:19 2016
+## Date of fit: Fri Nov 18 15:22:04 2016
+## Date of summary: Fri Nov 18 15:22:04 2016
##
##
## Warning: Optimisation by method Port did not converge.
@@ -169,7 +169,7 @@ FOCUS_2006_L1_mkin &lt;-<span class="st"> </span><span class="kw"><a href="../re
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 188 model solutions performed in 0.462 s
+## Fitted with method Port using 188 model solutions performed in 0.445 s
##
## Weighting: none
##
@@ -253,15 +253,15 @@ FOCUS_2006_L2_mkin &lt;-<span class="st"> </span><span class="kw"><a href="../re
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="kw">summary</span>(m.L2.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</code></pre></div>
<pre><code>## mkin version: 0.9.44.9000
## R version: 3.3.2
-## Date of fit: Thu Nov 17 22:58:20 2016
-## Date of summary: Thu Nov 17 22:58:20 2016
+## Date of fit: Fri Nov 18 15:22:05 2016
+## Date of summary: Fri Nov 18 15:22:05 2016
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 81 model solutions performed in 0.195 s
+## Fitted with method Port using 81 model solutions performed in 0.19 s
##
## Weighting: none
##
@@ -323,8 +323,8 @@ FOCUS_2006_L2_mkin &lt;-<span class="st"> </span><span class="kw"><a href="../re
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="kw">summary</span>(m.L2.DFOP, <span class="dt">data =</span> <span class="ot">FALSE</span>)</code></pre></div>
<pre><code>## mkin version: 0.9.44.9000
## R version: 3.3.2
-## Date of fit: Thu Nov 17 22:58:21 2016
-## Date of summary: Thu Nov 17 22:58:21 2016
+## Date of fit: Fri Nov 18 15:22:06 2016
+## Date of summary: Fri Nov 18 15:22:06 2016
##
## Equations:
## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
@@ -333,7 +333,7 @@ FOCUS_2006_L2_mkin &lt;-<span class="st"> </span><span class="kw"><a href="../re
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 336 model solutions performed in 0.882 s
+## Fitted with method Port using 336 model solutions performed in 0.803 s
##
## Weighting: none
##
@@ -412,8 +412,8 @@ mm.L3 &lt;-<span class="st"> </span><span class="kw"><a href="../reference/mmkin
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="kw">summary</span>(mm.L3[[<span class="st">"DFOP"</span>, <span class="dv">1</span>]])</code></pre></div>
<pre><code>## mkin version: 0.9.44.9000
## R version: 3.3.2
-## Date of fit: Thu Nov 17 22:58:22 2016
-## Date of summary: Thu Nov 17 22:58:22 2016
+## Date of fit: Fri Nov 18 15:22:07 2016
+## Date of summary: Fri Nov 18 15:22:07 2016
##
## Equations:
## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
@@ -422,7 +422,7 @@ mm.L3 &lt;-<span class="st"> </span><span class="kw"><a href="../reference/mmkin
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 137 model solutions performed in 0.338 s
+## Fitted with method Port using 137 model solutions performed in 0.329 s
##
## Weighting: none
##
@@ -512,15 +512,15 @@ mm.L4 &lt;-<span class="st"> </span><span class="kw"><a href="../reference/mmkin
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="kw">summary</span>(mm.L4[[<span class="st">"SFO"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</code></pre></div>
<pre><code>## mkin version: 0.9.44.9000
## R version: 3.3.2
-## Date of fit: Thu Nov 17 22:58:22 2016
-## Date of summary: Thu Nov 17 22:58:23 2016
+## Date of fit: Fri Nov 18 15:22:08 2016
+## Date of summary: Fri Nov 18 15:22:08 2016
##
## Equations:
## d_parent/dt = - k_parent_sink * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 46 model solutions performed in 0.114 s
+## Fitted with method Port using 46 model solutions performed in 0.109 s
##
## Weighting: none
##
@@ -572,15 +572,15 @@ mm.L4 &lt;-<span class="st"> </span><span class="kw"><a href="../reference/mmkin
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="kw">summary</span>(mm.L4[[<span class="st">"FOMC"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</code></pre></div>
<pre><code>## mkin version: 0.9.44.9000
## R version: 3.3.2
-## Date of fit: Thu Nov 17 22:58:23 2016
-## Date of summary: Thu Nov 17 22:58:23 2016
+## Date of fit: Fri Nov 18 15:22:08 2016
+## Date of summary: Fri Nov 18 15:22:08 2016
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 66 model solutions performed in 0.151 s
+## Fitted with method Port using 66 model solutions performed in 0.15 s
##
## Weighting: none
##

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