Update static docs

1 files changed, 34 insertions, 31 deletions

diff --git a/docs/articles/prebuilt/2022_dmta_pathway.html b/docs/articles/prebuilt/2022_dmta_pathway.html
index ea4bd087..2c3f326a 100644
--- a/docs/articles/prebuilt/2022_dmta_pathway.html
+++ b/docs/articles/prebuilt/2022_dmta_pathway.html
@@ -33,7 +33,7 @@
       </button>
       <span class="navbar-brand">
         <a class="navbar-link" href="../../index.html">mkin</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.2.4</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.2.6</span>
       </span>
     </div>
 
@@ -74,6 +74,9 @@
       <a href="../../articles/prebuilt/2022_dmta_pathway.html">Testing hierarchical pathway kinetics with residue data on dimethenamid and dimethenamid-P</a>
     </li>
     <li>
+      <a href="../../articles/prebuilt/2023_mesotrione_parent.html">Testing covariate modelling in hierarchical parent degradation kinetics with residue data on mesotrione</a>
+    </li>
+    <li>
       <a href="../../articles/prebuilt/2022_cyan_pathway.html">Testing hierarchical pathway kinetics with residue data on cyantraniliprole</a>
     </li>
     <li>
@@ -135,7 +138,7 @@ residue data on dimethenamid and dimethenamid-P</h1>
 Ranke</h4>
             
             <h4 data-toc-skip class="date">Last change on 20 April 2023,
-last compiled on 19 Mai 2023</h4>
+last compiled on 30 October 2023</h4>
       
       <small class="dont-index">Source: <a href="https://github.com/jranke/mkin/blob/HEAD/vignettes/prebuilt/2022_dmta_pathway.rmd" class="external-link"><code>vignettes/prebuilt/2022_dmta_pathway.rmd</code></a></small>
       <div class="hidden name"><code>2022_dmta_pathway.rmd</code></div>
@@ -155,7 +158,7 @@ can be fitted with the mkin package.</p>
 173340 (Application of nonlinear hierarchical models to the kinetic
 evaluation of chemical degradation data) of the German Environment
 Agency carried out in 2022 and 2023.</p>
-<p>The mkin package is used in version 1.2.4, which is currently under
+<p>The mkin package is used in version 1.2.6, which is currently under
 development. It contains the test data, and the functions used in the
 evaluations. The <code>saemix</code> package is used as a backend for
 fitting the NLHM, but is also loaded to make the convergence plot
@@ -1976,23 +1979,23 @@ error<a class="anchor" aria-label="anchor" href="#improved-fit-of-the-sforb-path
 <div class="section level3">
 <h3 id="session-info">Session info<a class="anchor" aria-label="anchor" href="#session-info"></a>
 </h3>
-<pre><code>R version 4.3.0 Patched (2023-05-18 r84448)
+<pre><code>R version 4.3.1 (2023-06-16)
 Platform: x86_64-pc-linux-gnu (64-bit)
-Running under: Debian GNU/Linux 12 (bookworm)
+Running under: Ubuntu 22.04.3 LTS
 
 Matrix products: default
-BLAS:   /home/jranke/svn/R/r-patched/build/lib/libRblas.so 
-LAPACK: /usr/lib/x86_64-linux-gnu/openblas-serial/liblapack.so.3;  LAPACK version 3.11.0
+BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.10.0 
+LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.10.0
 
 locale:
- [1] LC_CTYPE=de_DE.UTF-8       LC_NUMERIC=C              
- [3] LC_TIME=de_DE.UTF-8        LC_COLLATE=de_DE.UTF-8    
- [5] LC_MONETARY=de_DE.UTF-8    LC_MESSAGES=de_DE.UTF-8   
- [7] LC_PAPER=de_DE.UTF-8       LC_NAME=C                 
+ [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
+ [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
+ [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
+ [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
-[11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C       
+[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
 
-time zone: Europe/Berlin
+time zone: Europe/Zurich
 tzcode source: system (glibc)
 
 attached base packages:
@@ -2000,31 +2003,31 @@ attached base packages:
 [8] base     
 
 other attached packages:
-[1] saemix_3.2 npde_3.3   knitr_1.42 mkin_1.2.4
+[1] saemix_3.2 npde_3.3   knitr_1.44 mkin_1.2.6
 
 loaded via a namespace (and not attached):
- [1] sass_0.4.6        utf8_1.2.3        generics_0.1.3    stringi_1.7.12   
- [5] lattice_0.21-8    digest_0.6.31     magrittr_2.0.3    evaluate_0.21    
- [9] grid_4.3.0        fastmap_1.1.1     rprojroot_2.0.3   jsonlite_1.8.4   
-[13] processx_3.8.1    pkgbuild_1.4.0    deSolve_1.35      DBI_1.1.3        
-[17] mclust_6.0.0      ps_1.7.5          gridExtra_2.3     purrr_1.0.1      
-[21] fansi_1.0.4       scales_1.2.1      codetools_0.2-19  textshaping_0.3.6
-[25] jquerylib_0.1.4   cli_3.6.1         crayon_1.5.2      rlang_1.1.1      
-[29] munsell_0.5.0     cachem_1.0.8      yaml_2.3.7        inline_0.3.19    
-[33] tools_4.3.0       memoise_2.0.1     dplyr_1.1.2       colorspace_2.1-0 
-[37] ggplot2_3.4.2     vctrs_0.6.2       R6_2.5.1          zoo_1.8-12       
-[41] lifecycle_1.0.3   stringr_1.5.0     fs_1.6.2          ragg_1.2.5       
+ [1] sass_0.4.7        utf8_1.2.3        generics_0.1.3    stringi_1.7.12   
+ [5] lattice_0.21-9    digest_0.6.33     magrittr_2.0.3    evaluate_0.22    
+ [9] grid_4.3.1        fastmap_1.1.1     rprojroot_2.0.3   jsonlite_1.8.7   
+[13] processx_3.8.2    pkgbuild_1.4.2    deSolve_1.35      mclust_6.0.0     
+[17] ps_1.7.5          gridExtra_2.3     purrr_1.0.1       fansi_1.0.4      
+[21] scales_1.2.1      codetools_0.2-19  textshaping_0.3.6 jquerylib_0.1.4  
+[25] cli_3.6.1         crayon_1.5.2      rlang_1.1.1       munsell_0.5.0    
+[29] cachem_1.0.8      yaml_2.3.7        inline_0.3.19     tools_4.3.1      
+[33] memoise_2.0.1     dplyr_1.1.2       colorspace_2.1-0  ggplot2_3.4.2    
+[37] vctrs_0.6.3       R6_2.5.1          zoo_1.8-12        lifecycle_1.0.3  
+[41] stringr_1.5.0     fs_1.6.3          MASS_7.3-60       ragg_1.2.5       
 [45] callr_3.7.3       pkgconfig_2.0.3   desc_1.4.2        pkgdown_2.0.7    
-[49] bslib_0.4.2       pillar_1.9.0      gtable_0.3.3      glue_1.6.2       
-[53] systemfonts_1.0.4 highr_0.10        xfun_0.39         tibble_3.2.1     
-[57] lmtest_0.9-40     tidyselect_1.2.0  htmltools_0.5.5   nlme_3.1-162     
-[61] rmarkdown_2.21    compiler_4.3.0    prettyunits_1.1.1</code></pre>
+[49] bslib_0.5.1       pillar_1.9.0      gtable_0.3.3      glue_1.6.2       
+[53] systemfonts_1.0.4 xfun_0.40         tibble_3.2.1      lmtest_0.9-40    
+[57] tidyselect_1.2.0  rstudioapi_0.15.0 htmltools_0.5.6.1 nlme_3.1-163     
+[61] rmarkdown_2.23    compiler_4.3.1    prettyunits_1.2.0</code></pre>
 </div>
 <div class="section level3">
 <h3 id="hardware-info">Hardware info<a class="anchor" aria-label="anchor" href="#hardware-info"></a>
 </h3>
-<pre><code>CPU model: AMD Ryzen 9 7950X 16-Core Processor</code></pre>
-<pre><code>MemTotal:       64925476 kB</code></pre>
+<pre><code>CPU model: Intel(R) Xeon(R) Gold 6134 CPU @ 3.20GHz</code></pre>
+<pre><code>MemTotal:       247605564 kB</code></pre>
 </div>
 </div>
   </div>