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authorJohannes Ranke <jranke@uni-bremen.de>2023-05-19 22:35:52 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2023-05-19 22:35:52 +0200
commita01fe8923ff50dcc76c34fb09ad500f5f5433063 (patch)
tree1145c7038a0c85b2642fc9c8ccf7bfdf03c4645a /docs/dev/articles/FOCUS_L.html
parent35ed120cf28459394b2e00ff94ea2cf6096d8bd7 (diff)
Release date, update pkgdown development docs
Diffstat (limited to 'docs/dev/articles/FOCUS_L.html')
-rw-r--r--docs/dev/articles/FOCUS_L.html62
1 files changed, 31 insertions, 31 deletions
diff --git a/docs/dev/articles/FOCUS_L.html b/docs/dev/articles/FOCUS_L.html
index 853194fb..9500e661 100644
--- a/docs/dev/articles/FOCUS_L.html
+++ b/docs/dev/articles/FOCUS_L.html
@@ -34,7 +34,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mkin</a>
- <span class="version label label-info" data-toggle="tooltip" data-placement="bottom" title="In-development version">1.2.3</span>
+ <span class="version label label-info" data-toggle="tooltip" data-placement="bottom" title="In-development version">1.2.5</span>
</span>
</div>
@@ -135,8 +135,8 @@ to L3</h1>
<h4 data-toc-skip class="author">Johannes
Ranke</h4>
- <h4 data-toc-skip class="date">Last change 18 May 2022
-(rebuilt 2023-04-16)</h4>
+ <h4 data-toc-skip class="date">Last change 18 May 2023
+(rebuilt 2023-05-19)</h4>
<small class="dont-index">Source: <a href="https://github.com/jranke/mkin/blob/HEAD/vignettes/FOCUS_L.rmd" class="external-link"><code>vignettes/FOCUS_L.rmd</code></a></small>
<div class="hidden name"><code>FOCUS_L.rmd</code></div>
@@ -170,10 +170,10 @@ report.</p>
<div class="sourceCode" id="cb2"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="va">m.L1.SFO</span> <span class="op">&lt;-</span> <span class="fu"><a href="../reference/mkinfit.html">mkinfit</a></span><span class="op">(</span><span class="st">"SFO"</span>, <span class="va">FOCUS_2006_L1_mkin</span>, quiet <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span>
<span><span class="fu"><a href="https://rdrr.io/pkg/saemix/man/summary-methods.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">m.L1.SFO</span><span class="op">)</span></span></code></pre></div>
-<pre><code><span><span class="co">## mkin version used for fitting: 1.2.3 </span></span>
-<span><span class="co">## R version used for fitting: 4.2.3 </span></span>
-<span><span class="co">## Date of fit: Sun Apr 16 08:35:14 2023 </span></span>
-<span><span class="co">## Date of summary: Sun Apr 16 08:35:14 2023 </span></span>
+<pre><code><span><span class="co">## mkin version used for fitting: 1.2.5 </span></span>
+<span><span class="co">## R version used for fitting: 4.3.0 </span></span>
+<span><span class="co">## Date of fit: Fri May 19 17:34:11 2023 </span></span>
+<span><span class="co">## Date of summary: Fri May 19 17:34:11 2023 </span></span>
<span><span class="co">## </span></span>
<span><span class="co">## Equations:</span></span>
<span><span class="co">## d_parent/dt = - k_parent * parent</span></span>
@@ -277,10 +277,10 @@ objects.</p>
<pre><code><span><span class="co">## Warning in sqrt(1/diag(V)): NaNs produced</span></span></code></pre>
<pre><code><span><span class="co">## Warning in cov2cor(ans$covar): diag(.) had 0 or NA entries; non-finite result</span></span>
<span><span class="co">## is doubtful</span></span></code></pre>
-<pre><code><span><span class="co">## mkin version used for fitting: 1.2.3 </span></span>
-<span><span class="co">## R version used for fitting: 4.2.3 </span></span>
-<span><span class="co">## Date of fit: Sun Apr 16 08:35:14 2023 </span></span>
-<span><span class="co">## Date of summary: Sun Apr 16 08:35:14 2023 </span></span>
+<pre><code><span><span class="co">## mkin version used for fitting: 1.2.5 </span></span>
+<span><span class="co">## R version used for fitting: 4.3.0 </span></span>
+<span><span class="co">## Date of fit: Fri May 19 17:34:12 2023 </span></span>
+<span><span class="co">## Date of summary: Fri May 19 17:34:12 2023 </span></span>
<span><span class="co">## </span></span>
<span><span class="co">## Equations:</span></span>
<span><span class="co">## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent</span></span>
@@ -428,10 +428,10 @@ kinetics.</p>
<p><img src="FOCUS_L_files/figure-html/unnamed-chunk-9-1.png" width="672"></p>
<div class="sourceCode" id="cb17"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="fu"><a href="https://rdrr.io/pkg/saemix/man/summary-methods.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">m.L2.FOMC</span>, data <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span></span></code></pre></div>
-<pre><code><span><span class="co">## mkin version used for fitting: 1.2.3 </span></span>
-<span><span class="co">## R version used for fitting: 4.2.3 </span></span>
-<span><span class="co">## Date of fit: Sun Apr 16 08:35:14 2023 </span></span>
-<span><span class="co">## Date of summary: Sun Apr 16 08:35:14 2023 </span></span>
+<pre><code><span><span class="co">## mkin version used for fitting: 1.2.5 </span></span>
+<span><span class="co">## R version used for fitting: 4.3.0 </span></span>
+<span><span class="co">## Date of fit: Fri May 19 17:34:12 2023 </span></span>
+<span><span class="co">## Date of summary: Fri May 19 17:34:12 2023 </span></span>
<span><span class="co">## </span></span>
<span><span class="co">## Equations:</span></span>
<span><span class="co">## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent</span></span>
@@ -512,10 +512,10 @@ the data.</p>
<p><img src="FOCUS_L_files/figure-html/unnamed-chunk-10-1.png" width="672"></p>
<div class="sourceCode" id="cb20"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="fu"><a href="https://rdrr.io/pkg/saemix/man/summary-methods.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">m.L2.DFOP</span>, data <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span></span></code></pre></div>
-<pre><code><span><span class="co">## mkin version used for fitting: 1.2.3 </span></span>
-<span><span class="co">## R version used for fitting: 4.2.3 </span></span>
-<span><span class="co">## Date of fit: Sun Apr 16 08:35:15 2023 </span></span>
-<span><span class="co">## Date of summary: Sun Apr 16 08:35:15 2023 </span></span>
+<pre><code><span><span class="co">## mkin version used for fitting: 1.2.5 </span></span>
+<span><span class="co">## R version used for fitting: 4.3.0 </span></span>
+<span><span class="co">## Date of fit: Fri May 19 17:34:12 2023 </span></span>
+<span><span class="co">## Date of summary: Fri May 19 17:34:12 2023 </span></span>
<span><span class="co">## </span></span>
<span><span class="co">## Equations:</span></span>
<span><span class="co">## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *</span></span>
@@ -629,10 +629,10 @@ using square brackets for indexing which will result in the use of the
summary and plot functions working on mkinfit objects.</p>
<div class="sourceCode" id="cb24"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="fu"><a href="https://rdrr.io/pkg/saemix/man/summary-methods.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">mm.L3</span><span class="op">[[</span><span class="st">"DFOP"</span>, <span class="fl">1</span><span class="op">]</span><span class="op">]</span><span class="op">)</span></span></code></pre></div>
-<pre><code><span><span class="co">## mkin version used for fitting: 1.2.3 </span></span>
-<span><span class="co">## R version used for fitting: 4.2.3 </span></span>
-<span><span class="co">## Date of fit: Sun Apr 16 08:35:15 2023 </span></span>
-<span><span class="co">## Date of summary: Sun Apr 16 08:35:15 2023 </span></span>
+<pre><code><span><span class="co">## mkin version used for fitting: 1.2.5 </span></span>
+<span><span class="co">## R version used for fitting: 4.3.0 </span></span>
+<span><span class="co">## Date of fit: Fri May 19 17:34:13 2023 </span></span>
+<span><span class="co">## Date of summary: Fri May 19 17:34:13 2023 </span></span>
<span><span class="co">## </span></span>
<span><span class="co">## Equations:</span></span>
<span><span class="co">## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *</span></span>
@@ -756,10 +756,10 @@ passes is slightly lower for the FOMC model. However, the difference
appears negligible.</p>
<div class="sourceCode" id="cb29"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="fu"><a href="https://rdrr.io/pkg/saemix/man/summary-methods.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">mm.L4</span><span class="op">[[</span><span class="st">"SFO"</span>, <span class="fl">1</span><span class="op">]</span><span class="op">]</span>, data <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span></span></code></pre></div>
-<pre><code><span><span class="co">## mkin version used for fitting: 1.2.3 </span></span>
-<span><span class="co">## R version used for fitting: 4.2.3 </span></span>
-<span><span class="co">## Date of fit: Sun Apr 16 08:35:15 2023 </span></span>
-<span><span class="co">## Date of summary: Sun Apr 16 08:35:16 2023 </span></span>
+<pre><code><span><span class="co">## mkin version used for fitting: 1.2.5 </span></span>
+<span><span class="co">## R version used for fitting: 4.3.0 </span></span>
+<span><span class="co">## Date of fit: Fri May 19 17:34:13 2023 </span></span>
+<span><span class="co">## Date of summary: Fri May 19 17:34:13 2023 </span></span>
<span><span class="co">## </span></span>
<span><span class="co">## Equations:</span></span>
<span><span class="co">## d_parent/dt = - k_parent * parent</span></span>
@@ -821,10 +821,10 @@ appears negligible.</p>
<span><span class="co">## parent 106 352</span></span></code></pre>
<div class="sourceCode" id="cb31"><pre class="downlit sourceCode r">
<code class="sourceCode R"><span><span class="fu"><a href="https://rdrr.io/pkg/saemix/man/summary-methods.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">mm.L4</span><span class="op">[[</span><span class="st">"FOMC"</span>, <span class="fl">1</span><span class="op">]</span><span class="op">]</span>, data <span class="op">=</span> <span class="cn">FALSE</span><span class="op">)</span></span></code></pre></div>
-<pre><code><span><span class="co">## mkin version used for fitting: 1.2.3 </span></span>
-<span><span class="co">## R version used for fitting: 4.2.3 </span></span>
-<span><span class="co">## Date of fit: Sun Apr 16 08:35:15 2023 </span></span>
-<span><span class="co">## Date of summary: Sun Apr 16 08:35:16 2023 </span></span>
+<pre><code><span><span class="co">## mkin version used for fitting: 1.2.5 </span></span>
+<span><span class="co">## R version used for fitting: 4.3.0 </span></span>
+<span><span class="co">## Date of fit: Fri May 19 17:34:13 2023 </span></span>
+<span><span class="co">## Date of summary: Fri May 19 17:34:13 2023 </span></span>
<span><span class="co">## </span></span>
<span><span class="co">## Equations:</span></span>
<span><span class="co">## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent</span></span>

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