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authorJohannes Ranke <johannes.ranke@jrwb.de>2025-02-16 17:27:18 +0100
committerJohannes Ranke <johannes.ranke@jrwb.de>2025-02-16 17:29:28 +0100
commit4f62f39b8979cb3a5c52d65d425e530dc0770665 (patch)
tree895d4bde0773a600943e5c308e17651c12358a67 /docs/dev/reference/saem.html
parent44c30938872bd7cc80a4c84dd4db593e26000fce (diff)
Fix solution type "deSolve" for a special caseHEADdev
The special case occurs if not observed data for time zero are available. Fixes #16. Write NEWS and update docs. A lot of html was regenerated, because I had checked out the main branch in between, which made pkgdown believe that I have changed the help files.
Diffstat (limited to 'docs/dev/reference/saem.html')
-rw-r--r--docs/dev/reference/saem.html8
1 files changed, 4 insertions, 4 deletions
diff --git a/docs/dev/reference/saem.html b/docs/dev/reference/saem.html
index 25eb03c7..d2ea6e1a 100644
--- a/docs/dev/reference/saem.html
+++ b/docs/dev/reference/saem.html
@@ -397,8 +397,8 @@ using <a href="mmkin.html">mmkin</a>.</p>
<span class="r-out co"><span class="r-pr">#&gt;</span> saemix version used for fitting: 3.3 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> mkin version used for pre-fitting: 1.2.10 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> R version used for fitting: 4.4.2 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> Date of fit: Fri Feb 14 07:32:13 2025 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> Date of summary: Fri Feb 14 07:32:13 2025 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Date of fit: Sun Feb 16 17:01:05 2025 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Date of summary: Sun Feb 16 17:01:05 2025 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Equations:</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *</span>
@@ -413,7 +413,7 @@ using <a href="mmkin.html">mmkin</a>.</p>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Model predictions using solution type analytical </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> Fitted in 3.605 s</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Fitted in 3.489 s</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Using 300, 100 iterations and 10 chains</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Variance model: Constant variance </span>
@@ -695,7 +695,7 @@ using <a href="mmkin.html">mmkin</a>.</p>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> In above message, R1 = 91</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> Error in deSolve::lsoda(y = odeini, times = outtimes, func = lsoda_func, : </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Error in deSolve::lsoda(y = odeini, times = outtimes_deSolve, func = lsoda_func, : </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> illegal input detected before taking any integration steps - see written message</span>
<span class="r-in"><span></span></span>
<span class="r-in"><span><span class="co">#anova(</span></span></span>

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