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authorJohannes Ranke <jranke@uni-bremen.de>2021-02-15 14:08:13 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2021-02-15 15:20:53 +0100
commita9427a09abdf7ce9aaeae7c7190f90c8f2e5ef52 (patch)
treea9ecf25af6657e70d8f1faabd88fb6e2f6334b07 /docs/reference/AIC.mmkin.html
parentb4582fc7d3f1d395bfd9d870137b705469d9eab2 (diff)
Improve README, introductory vignette and some other docsv1.0.3
Also bump version to 1.0.3.
Diffstat (limited to 'docs/reference/AIC.mmkin.html')
-rw-r--r--docs/reference/AIC.mmkin.html11
1 files changed, 5 insertions, 6 deletions
diff --git a/docs/reference/AIC.mmkin.html b/docs/reference/AIC.mmkin.html
index f54fd70f..fbc90802 100644
--- a/docs/reference/AIC.mmkin.html
+++ b/docs/reference/AIC.mmkin.html
@@ -73,7 +73,7 @@ same dataset." />
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mkin</a>
- <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.0.0</span>
+ <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.0.3</span>
</span>
</div>
@@ -187,8 +187,7 @@ dataframe if there are several fits in the column).</p>
<span class='va'>f</span> <span class='op'>&lt;-</span> <span class='fu'><a href='mmkin.html'>mmkin</a></span><span class='op'>(</span><span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span><span class='op'>(</span><span class='st'>"SFO"</span>, <span class='st'>"FOMC"</span>, <span class='st'>"DFOP"</span><span class='op'>)</span>,
<span class='fu'><a href='https://rdrr.io/r/base/list.html'>list</a></span><span class='op'>(</span><span class='st'>"FOCUS A"</span> <span class='op'>=</span> <span class='va'>FOCUS_2006_A</span>,
<span class='st'>"FOCUS C"</span> <span class='op'>=</span> <span class='va'>FOCUS_2006_C</span><span class='op'>)</span>, cores <span class='op'>=</span> <span class='fl'>1</span>, quiet <span class='op'>=</span> <span class='cn'>TRUE</span><span class='op'>)</span>
-</div><div class='output co'>#&gt; <span class='warning'>Warning: Optimisation did not converge:</span>
-#&gt; <span class='warning'>false convergence (8)</span></div><div class='input'> <span class='co'># We get a warning because the FOMC model does not converge for the</span>
+ <span class='co'># We get a warning because the FOMC model does not converge for the</span>
<span class='co'># FOCUS A dataset, as it is well described by SFO</span>
<span class='fu'><a href='https://rdrr.io/r/stats/AIC.html'>AIC</a></span><span class='op'>(</span><span class='va'>f</span><span class='op'>[</span><span class='st'>"SFO"</span>, <span class='st'>"FOCUS A"</span><span class='op'>]</span><span class='op'>)</span> <span class='co'># We get a single number for a single fit</span>
@@ -199,15 +198,15 @@ dataframe if there are several fits in the column).</p>
<span class='fu'><a href='https://rdrr.io/r/stats/AIC.html'>AIC</a></span><span class='op'>(</span><span class='va'>f</span><span class='op'>[</span>, <span class='st'>"FOCUS A"</span><span class='op'>]</span><span class='op'>)</span>
</div><div class='output co'>#&gt; df AIC
#&gt; SFO 3 55.28197
-#&gt; FOMC 4 57.28211
+#&gt; FOMC 4 57.28222
#&gt; DFOP 5 59.28197</div><div class='input'> <span class='fu'><a href='https://rdrr.io/r/stats/AIC.html'>AIC</a></span><span class='op'>(</span><span class='va'>f</span><span class='op'>[</span>, <span class='st'>"FOCUS A"</span><span class='op'>]</span>, k <span class='op'>=</span> <span class='fl'>0</span><span class='op'>)</span> <span class='co'># If we do not penalize additional parameters, we get nearly the same</span>
</div><div class='output co'>#&gt; df AIC
#&gt; SFO 3 49.28197
-#&gt; FOMC 4 49.28211
+#&gt; FOMC 4 49.28222
#&gt; DFOP 5 49.28197</div><div class='input'> <span class='fu'><a href='https://rdrr.io/r/stats/AIC.html'>BIC</a></span><span class='op'>(</span><span class='va'>f</span><span class='op'>[</span>, <span class='st'>"FOCUS A"</span><span class='op'>]</span><span class='op'>)</span> <span class='co'># Comparing the BIC gives a very similar picture</span>
</div><div class='output co'>#&gt; df BIC
#&gt; SFO 3 55.52030
-#&gt; FOMC 4 57.59987
+#&gt; FOMC 4 57.59999
#&gt; DFOP 5 59.67918</div><div class='input'>
<span class='co'># For FOCUS C, the more complex models fit better</span>
<span class='fu'><a href='https://rdrr.io/r/stats/AIC.html'>AIC</a></span><span class='op'>(</span><span class='va'>f</span><span class='op'>[</span>, <span class='st'>"FOCUS C"</span><span class='op'>]</span><span class='op'>)</span>

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