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authorJohannes Ranke <jranke@uni-bremen.de>2020-05-11 05:15:19 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2020-05-11 05:18:32 +0200
commit234c9059a95e104917e488a6ddd2313234a96cdc (patch)
treef6e54098f79d94578434ef727b62f7cc5d5e79b7 /docs/reference/mkinmod.html
parentd113cd79b178fdc91aecb894707ed356129dfb75 (diff)
Avoid merge() and data.frame() in cost function
also for deSolve and eigenvalue based solutions. This noticeably increases performance for these methods, see test.log and benchmark vignette.
Diffstat (limited to 'docs/reference/mkinmod.html')
-rw-r--r--docs/reference/mkinmod.html4
1 files changed, 2 insertions, 2 deletions
diff --git a/docs/reference/mkinmod.html b/docs/reference/mkinmod.html
index 2f2e89d9..81b62ae1 100644
--- a/docs/reference/mkinmod.html
+++ b/docs/reference/mkinmod.html
@@ -237,7 +237,7 @@ in the FOCUS and NAFTA guidance documents are used.</p>
<h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
<pre class="examples"><div class='input'>
<span class='co'># Specify the SFO model (this is not needed any more, as we can now mkinfit("SFO", ...)</span>
-<span class='no'>SFO</span> <span class='kw'>&lt;-</span> <span class='fu'>mkinmod</span>(<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/list.html'>list</a></span>(<span class='kw'>type</span> <span class='kw'>=</span> <span class='st'>"SFO"</span>))
+<span class='no'>SFO</span> <span class='kw'>&lt;-</span> <span class='fu'>mkinmod</span>(<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'><a href='mkinsub.html'>mkinsub</a></span>(<span class='st'>"SFO"</span>))
<span class='co'># One parent compound, one metabolite, both single first order</span>
<span class='no'>SFO_SFO</span> <span class='kw'>&lt;-</span> <span class='fu'>mkinmod</span>(
@@ -252,7 +252,7 @@ in the FOCUS and NAFTA guidance documents are used.</p>
<span class='no'>SFO_SFO</span> <span class='kw'>&lt;-</span> <span class='fu'>mkinmod</span>(
<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'><a href='mkinsub.html'>mkinsub</a></span>(<span class='st'>"SFO"</span>, <span class='st'>"m1"</span>),
<span class='kw'>m1</span> <span class='kw'>=</span> <span class='fu'><a href='mkinsub.html'>mkinsub</a></span>(<span class='st'>"SFO"</span>), <span class='kw'>verbose</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)</div><div class='output co'>#&gt; Compilation argument:
-#&gt; /usr/lib/R/bin/R CMD SHLIB fileb6a4eaab60.c 2&gt; fileb6a4eaab60.c.err.txt
+#&gt; /usr/lib/R/bin/R CMD SHLIB file1a1abf38df.c 2&gt; file1a1abf38df.c.err.txt
#&gt; Program source:
#&gt; 1: #include &lt;R.h&gt;
#&gt; 2:

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