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| author | Johannes Ranke <jranke@uni-bremen.de> | 2019-05-07 08:43:12 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2019-05-07 08:43:12 +0200 |
| commit | c322a8102a399cbb1fe38c4c4ca4485cea8bc4e8 (patch) | |
| tree | 892ba3d6db12d7f2c6af55beaa12cc8b43d40df3 /docs/reference/summary.mkinfit.html | |
| parent | 8a3475c59f3d91ce5ce7d980d6de09360617e7fe (diff) | |
Fix hessian calculations
Static documentation rebuilt by pkgdown
Diffstat (limited to 'docs/reference/summary.mkinfit.html')
| -rw-r--r-- | docs/reference/summary.mkinfit.html | 30 |
1 files changed, 17 insertions, 13 deletions
diff --git a/docs/reference/summary.mkinfit.html b/docs/reference/summary.mkinfit.html index a4f3d04f..9c4a21a9 100644 --- a/docs/reference/summary.mkinfit.html +++ b/docs/reference/summary.mkinfit.html @@ -209,17 +209,17 @@ <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2> - <pre class="examples"><div class='input'> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/summary'>summary</a></span>(<span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='fu'><a href='mkinmod.html'>mkinmod</a></span>(<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'><a href='mkinsub.html'>mkinsub</a></span>(<span class='st'>"SFO"</span>)), <span class='no'>FOCUS_2006_A</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>))</div><div class='output co'>#> <span class='warning'>Warning: Could not calculate correlation; no covariance matrix</span></div><div class='output co'>#> mkin version used for fitting: 0.9.49.4 + <pre class="examples"><div class='input'> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/summary'>summary</a></span>(<span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='fu'><a href='mkinmod.html'>mkinmod</a></span>(<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'><a href='mkinsub.html'>mkinsub</a></span>(<span class='st'>"SFO"</span>)), <span class='no'>FOCUS_2006_A</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>))</div><div class='output co'>#> mkin version used for fitting: 0.9.49.4 #> R version used for fitting: 3.6.0 -#> Date of fit: Tue May 7 08:09:03 2019 -#> Date of summary: Tue May 7 08:09:03 2019 +#> Date of fit: Tue May 7 08:37:31 2019 +#> Date of summary: Tue May 7 08:37:31 2019 #> #> Equations: #> d_parent/dt = - k_parent_sink * parent #> #> Model predictions using solution type analytical #> -#> Fitted using 39 model solutions performed in 0.08 s +#> Fitted using 131 model solutions performed in 0.277 s #> #> Error model: #> Constant variance @@ -240,21 +240,25 @@ #> None #> #> Optimised, transformed parameters with symmetric confidence intervals: -#> Estimate Std. Error Lower Upper -#> parent_0 109.200 NA NA NA -#> log_k_parent_sink -3.291 NA NA NA -#> sigma 5.266 NA NA NA +#> Estimate Std. Error Lower Upper +#> parent_0 109.200 3.70400 99.630 118.700 +#> log_k_parent_sink -3.291 0.09176 -3.527 -3.055 +#> sigma 5.266 1.31600 1.882 8.649 #> #> Parameter correlation: -#> No covariance matrix +#> parent_0 log_k_parent_sink sigma +#> parent_0 1.000e+00 5.428e-01 1.648e-07 +#> log_k_parent_sink 5.428e-01 1.000e+00 2.513e-07 +#> sigma 1.648e-07 2.513e-07 1.000e+00 +#> #> Backtransformed parameters: #> Confidence intervals for internally transformed parameters are asymmetric. #> t-test (unrealistically) based on the assumption of normal distribution #> for estimators of untransformed parameters. -#> Estimate t value Pr(>t) Lower Upper -#> parent_0 109.20000 NA NA NA NA -#> k_parent_sink 0.03722 NA NA NA NA -#> sigma 5.26600 NA NA NA NA +#> Estimate t value Pr(>t) Lower Upper +#> parent_0 109.20000 29.47 4.218e-07 99.6300 118.70000 +#> k_parent_sink 0.03722 10.90 5.650e-05 0.0294 0.04712 +#> sigma 5.26600 4.00 5.162e-03 1.8820 8.64900 #> #> FOCUS Chi2 error levels in percent: #> err.min n.optim df |