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| author | Johannes Ranke <jranke@uni-bremen.de> | 2018-03-09 23:14:39 +0100 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2018-03-09 23:14:39 +0100 |
| commit | 0b677308e3ffbf742880f05cc54da469f3ecc854 (patch) | |
| tree | 26dab561d6f5a31923b28b5fdf6c1859727dfe7f /docs/reference/transform_odeparms.html | |
| parent | 5aec8e34680e05671347f7577ae36c9ad8e37063 (diff) | |
Another rebuild of the static docs
Now with rbenchmark installed, to get results for the compiled_models
vignette
Diffstat (limited to 'docs/reference/transform_odeparms.html')
| -rw-r--r-- | docs/reference/transform_odeparms.html | 18 |
1 files changed, 3 insertions, 15 deletions
diff --git a/docs/reference/transform_odeparms.html b/docs/reference/transform_odeparms.html index 630a5103..266db603 100644 --- a/docs/reference/transform_odeparms.html +++ b/docs/reference/transform_odeparms.html @@ -27,18 +27,6 @@ <script src="../pkgdown.js"></script> -<meta property="og:title" content="Functions to transform and backtransform kinetic parameters for fitting — transform_odeparms" /> - -<meta property="og:description" content="The transformations are intended to map parameters that should only take - on restricted values to the full scale of real numbers. For kinetic rate - constants and other paramters that can only take on positive values, a - simple log transformation is used. For compositional parameters, such as - the formations fractions that should always sum up to 1 and can not be - negative, the ilr transformation is used. -The transformation of sets of formation fractions is fragile, as it supposes - the same ordering of the components in forward and backward transformation. - This is no problem for the internal use in mkinfit." /> -<meta name="twitter:card" content="summary" /> <!-- mathjax --> <script src='https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML'></script> @@ -185,8 +173,8 @@ The transformation of sets of formation fractions is fragile, as it supposes <span class='no'>fit</span> <span class='kw'><-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='no'>SFO_SFO</span>, <span class='no'>FOCUS_2006_D</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>) <span class='fu'>summary</span>(<span class='no'>fit</span>, <span class='kw'>data</span><span class='kw'>=</span><span class='fl'>FALSE</span>) <span class='co'># See transformed and backtransformed parameters</span></div><div class='output co'>#> mkin version used for fitting: 0.9.47.1 #> R version used for fitting: 3.4.3 -#> Date of fit: Thu Mar 1 14:26:28 2018 -#> Date of summary: Thu Mar 1 14:26:28 2018 +#> Date of fit: Fri Mar 9 23:08:30 2018 +#> Date of summary: Fri Mar 9 23:08:30 2018 #> #> Equations: #> d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent @@ -194,7 +182,7 @@ The transformation of sets of formation fractions is fragile, as it supposes #> #> Model predictions using solution type deSolve #> -#> Fitted with method Port using 153 model solutions performed in 0.571 s +#> Fitted with method Port using 153 model solutions performed in 0.657 s #> #> Weighting: none #> |