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authorJohannes Ranke <jranke@uni-bremen.de>2022-08-10 14:31:16 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2022-08-10 14:31:16 +0200
commit307e77e5bf81c7422055493cee7f073b57069c6c (patch)
treef014ab14c2aa084024b374753dd69d9a70337cc8 /docs
parent2890a954d8443e1aab04a5c5fa128574fa6cde87 (diff)
Update docs
Diffstat (limited to 'docs')
-rw-r--r--docs/pkgdown.yml2
-rw-r--r--docs/reference/Rplot001.pngbin18718 -> 1011 bytes
-rw-r--r--docs/reference/summary.saem.mmkin.html608
3 files changed, 348 insertions, 262 deletions
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
index b3090f05..f533f2ae 100644
--- a/docs/pkgdown.yml
+++ b/docs/pkgdown.yml
@@ -11,7 +11,7 @@ articles:
benchmarks: web_only/benchmarks.html
compiled_models: web_only/compiled_models.html
dimethenamid_2018: web_only/dimethenamid_2018.html
-last_built: 2022-08-10T11:14Z
+last_built: 2022-08-10T12:30Z
urls:
reference: https://pkgdown.jrwb.de/mkin/reference
article: https://pkgdown.jrwb.de/mkin/articles
diff --git a/docs/reference/Rplot001.png b/docs/reference/Rplot001.png
index 1ec32c4a..17a35806 100644
--- a/docs/reference/Rplot001.png
+++ b/docs/reference/Rplot001.png
Binary files differ
diff --git a/docs/reference/summary.saem.mmkin.html b/docs/reference/summary.saem.mmkin.html
index c2f9490e..0ab239cb 100644
--- a/docs/reference/summary.saem.mmkin.html
+++ b/docs/reference/summary.saem.mmkin.html
@@ -21,7 +21,7 @@ endpoints such as formation fractions and DT50 values. Optionally
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mkin</a>
- <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.1.0</span>
+ <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.1.2</span>
</span>
</div>
@@ -95,59 +95,88 @@ endpoints such as formation fractions and DT50 values. Optionally
</div>
<div id="ref-usage">
- <div class="sourceCode"><pre class="sourceCode r"><code><span class="co"># S3 method for saem.mmkin</span>
-<span class="fu"><a href="https://rdrr.io/pkg/saemix/man/summary-methods.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">object</span>, data <span class="op">=</span> <span class="cn">FALSE</span>, verbose <span class="op">=</span> <span class="cn">FALSE</span>, distimes <span class="op">=</span> <span class="cn">TRUE</span>, <span class="va">...</span><span class="op">)</span>
-
-<span class="co"># S3 method for summary.saem.mmkin</span>
-<span class="fu"><a href="https://rdrr.io/r/base/print.html" class="external-link">print</a></span><span class="op">(</span><span class="va">x</span>, digits <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/Extremes.html" class="external-link">max</a></span><span class="op">(</span><span class="fl">3</span>, <span class="fu"><a href="https://rdrr.io/r/base/options.html" class="external-link">getOption</a></span><span class="op">(</span><span class="st">"digits"</span><span class="op">)</span> <span class="op">-</span> <span class="fl">3</span><span class="op">)</span>, verbose <span class="op">=</span> <span class="va">x</span><span class="op">$</span><span class="va">verbose</span>, <span class="va">...</span><span class="op">)</span></code></pre></div>
+ <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="co"># S3 method for saem.mmkin</span></span>
+<span><span class="fu"><a href="https://rdrr.io/r/base/summary.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">object</span>, data <span class="op">=</span> <span class="cn">FALSE</span>, verbose <span class="op">=</span> <span class="cn">FALSE</span>, distimes <span class="op">=</span> <span class="cn">TRUE</span>, <span class="va">...</span><span class="op">)</span></span>
+<span></span>
+<span><span class="co"># S3 method for summary.saem.mmkin</span></span>
+<span><span class="fu"><a href="https://rdrr.io/r/base/print.html" class="external-link">print</a></span><span class="op">(</span><span class="va">x</span>, digits <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/Extremes.html" class="external-link">max</a></span><span class="op">(</span><span class="fl">3</span>, <span class="fu"><a href="https://rdrr.io/r/base/options.html" class="external-link">getOption</a></span><span class="op">(</span><span class="st">"digits"</span><span class="op">)</span> <span class="op">-</span> <span class="fl">3</span><span class="op">)</span>, verbose <span class="op">=</span> <span class="va">x</span><span class="op">$</span><span class="va">verbose</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
</div>
<div id="arguments">
<h2>Arguments</h2>
<dl><dt>object</dt>
<dd><p>an object of class <a href="saem.html">saem.mmkin</a></p></dd>
+
+
<dt>data</dt>
<dd><p>logical, indicating whether the full data should be included in
the summary.</p></dd>
+
+
<dt>verbose</dt>
<dd><p>Should the summary be verbose?</p></dd>
+
+
<dt>distimes</dt>
<dd><p>logical, indicating whether DT50 and DT90 values should be
included.</p></dd>
+
+
<dt>...</dt>
<dd><p>optional arguments passed to methods like <code>print</code>.</p></dd>
+
+
<dt>x</dt>
<dd><p>an object of class summary.saem.mmkin</p></dd>
+
+
<dt>digits</dt>
<dd><p>Number of digits to use for printing</p></dd>
+
</dl></div>
<div id="value">
<h2>Value</h2>
- <p>The summary function returns a list based on the <a href="https://rdrr.io/pkg/saemix/man/SaemixObject-class.html" class="external-link">saemix::SaemixObject</a>obtained in the fit, with at least the following additional components</p>
+
+
+<p>The summary function returns a list based on the <a href="https://rdrr.io/pkg/saemix/man/SaemixObject-class.html" class="external-link">saemix::SaemixObject</a></p>
+
+
+<p>obtained in the fit, with at least the following additional components</p>
<dl><dt>saemixversion, mkinversion, Rversion</dt>
<dd><p>The saemix, mkin and R versions used</p></dd>
+
<dt>date.fit, date.summary</dt>
<dd><p>The dates where the fit and the summary were
produced</p></dd>
+
<dt>diffs</dt>
<dd><p>The differential equations used in the degradation model</p></dd>
+
<dt>use_of_ff</dt>
<dd><p>Was maximum or minimum use made of formation fractions</p></dd>
+
<dt>data</dt>
<dd><p>The data</p></dd>
+
<dt>confint_trans</dt>
<dd><p>Transformed parameters as used in the optimisation, with confidence intervals</p></dd>
+
<dt>confint_back</dt>
<dd><p>Backtransformed parameters, with confidence intervals if available</p></dd>
+
<dt>confint_errmod</dt>
<dd><p>Error model parameters with confidence intervals</p></dd>
+
<dt>ff</dt>
<dd><p>The estimated formation fractions derived from the fitted
model.</p></dd>
+
<dt>distimes</dt>
<dd><p>The DT50 and DT90 values for each observed variable.</p></dd>
+
<dt>SFORB</dt>
<dd><p>If applicable, eigenvalues of SFORB components of the model.</p></dd>
+
</dl><p>The print method is called for its side effect, i.e. printing the summary.</p>
</div>
<div id="author">
@@ -158,50 +187,110 @@ saemix authors for the parts inherited from saemix.</p>
<div id="ref-examples">
<h2>Examples</h2>
- <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span class="co"># Generate five datasets following DFOP-SFO kinetics</span></span>
-<span class="r-in"><span class="va">sampling_times</span> <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">0</span>, <span class="fl">1</span>, <span class="fl">3</span>, <span class="fl">7</span>, <span class="fl">14</span>, <span class="fl">28</span>, <span class="fl">60</span>, <span class="fl">90</span>, <span class="fl">120</span><span class="op">)</span></span>
-<span class="r-in"><span class="va">dfop_sfo</span> <span class="op">&lt;-</span> <span class="fu"><a href="mkinmod.html">mkinmod</a></span><span class="op">(</span>parent <span class="op">=</span> <span class="fu"><a href="mkinmod.html">mkinsub</a></span><span class="op">(</span><span class="st">"DFOP"</span>, <span class="st">"m1"</span><span class="op">)</span>,</span>
-<span class="r-in"> m1 <span class="op">=</span> <span class="fu"><a href="mkinmod.html">mkinsub</a></span><span class="op">(</span><span class="st">"SFO"</span><span class="op">)</span>, quiet <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span>
-<span class="r-in"><span class="fu"><a href="https://rdrr.io/r/base/Random.html" class="external-link">set.seed</a></span><span class="op">(</span><span class="fl">1234</span><span class="op">)</span></span>
-<span class="r-in"><span class="va">k1_in</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/Lognormal.html" class="external-link">rlnorm</a></span><span class="op">(</span><span class="fl">5</span>, <span class="fu"><a href="https://rdrr.io/r/base/Log.html" class="external-link">log</a></span><span class="op">(</span><span class="fl">0.1</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span></span>
-<span class="r-in"><span class="va">k2_in</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/Lognormal.html" class="external-link">rlnorm</a></span><span class="op">(</span><span class="fl">5</span>, <span class="fu"><a href="https://rdrr.io/r/base/Log.html" class="external-link">log</a></span><span class="op">(</span><span class="fl">0.02</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span></span>
-<span class="r-in"><span class="va">g_in</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/Logistic.html" class="external-link">plogis</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/stats/Normal.html" class="external-link">rnorm</a></span><span class="op">(</span><span class="fl">5</span>, <span class="fu"><a href="https://rdrr.io/r/stats/Logistic.html" class="external-link">qlogis</a></span><span class="op">(</span><span class="fl">0.5</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span><span class="op">)</span></span>
-<span class="r-in"><span class="va">f_parent_to_m1_in</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/Logistic.html" class="external-link">plogis</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/stats/Normal.html" class="external-link">rnorm</a></span><span class="op">(</span><span class="fl">5</span>, <span class="fu"><a href="https://rdrr.io/r/stats/Logistic.html" class="external-link">qlogis</a></span><span class="op">(</span><span class="fl">0.3</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span><span class="op">)</span></span>
-<span class="r-in"><span class="va">k_m1_in</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/Lognormal.html" class="external-link">rlnorm</a></span><span class="op">(</span><span class="fl">5</span>, <span class="fu"><a href="https://rdrr.io/r/base/Log.html" class="external-link">log</a></span><span class="op">(</span><span class="fl">0.02</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span></span>
-<span class="r-in"></span>
-<span class="r-in"><span class="va">pred_dfop_sfo</span> <span class="op">&lt;-</span> <span class="kw">function</span><span class="op">(</span><span class="va">k1</span>, <span class="va">k2</span>, <span class="va">g</span>, <span class="va">f_parent_to_m1</span>, <span class="va">k_m1</span><span class="op">)</span> <span class="op">{</span></span>
-<span class="r-in"> <span class="fu"><a href="mkinpredict.html">mkinpredict</a></span><span class="op">(</span><span class="va">dfop_sfo</span>,</span>
-<span class="r-in"> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span>k1 <span class="op">=</span> <span class="va">k1</span>, k2 <span class="op">=</span> <span class="va">k2</span>, g <span class="op">=</span> <span class="va">g</span>, f_parent_to_m1 <span class="op">=</span> <span class="va">f_parent_to_m1</span>, k_m1 <span class="op">=</span> <span class="va">k_m1</span><span class="op">)</span>,</span>
-<span class="r-in"> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span>parent <span class="op">=</span> <span class="fl">100</span>, m1 <span class="op">=</span> <span class="fl">0</span><span class="op">)</span>,</span>
-<span class="r-in"> <span class="va">sampling_times</span><span class="op">)</span></span>
-<span class="r-in"><span class="op">}</span></span>
-<span class="r-in"></span>
-<span class="r-in"><span class="va">ds_mean_dfop_sfo</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply</a></span><span class="op">(</span><span class="fl">1</span><span class="op">:</span><span class="fl">5</span>, <span class="kw">function</span><span class="op">(</span><span class="va">i</span><span class="op">)</span> <span class="op">{</span></span>
-<span class="r-in"> <span class="fu"><a href="mkinpredict.html">mkinpredict</a></span><span class="op">(</span><span class="va">dfop_sfo</span>,</span>
-<span class="r-in"> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span>k1 <span class="op">=</span> <span class="va">k1_in</span><span class="op">[</span><span class="va">i</span><span class="op">]</span>, k2 <span class="op">=</span> <span class="va">k2_in</span><span class="op">[</span><span class="va">i</span><span class="op">]</span>, g <span class="op">=</span> <span class="va">g_in</span><span class="op">[</span><span class="va">i</span><span class="op">]</span>,</span>
-<span class="r-in"> f_parent_to_m1 <span class="op">=</span> <span class="va">f_parent_to_m1_in</span><span class="op">[</span><span class="va">i</span><span class="op">]</span>, k_m1 <span class="op">=</span> <span class="va">k_m1_in</span><span class="op">[</span><span class="va">i</span><span class="op">]</span><span class="op">)</span>,</span>
-<span class="r-in"> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span>parent <span class="op">=</span> <span class="fl">100</span>, m1 <span class="op">=</span> <span class="fl">0</span><span class="op">)</span>,</span>
-<span class="r-in"> <span class="va">sampling_times</span><span class="op">)</span></span>
-<span class="r-in"><span class="op">}</span><span class="op">)</span></span>
-<span class="r-in"><span class="fu"><a href="https://rdrr.io/r/base/names.html" class="external-link">names</a></span><span class="op">(</span><span class="va">ds_mean_dfop_sfo</span><span class="op">)</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/paste.html" class="external-link">paste</a></span><span class="op">(</span><span class="st">"ds"</span>, <span class="fl">1</span><span class="op">:</span><span class="fl">5</span><span class="op">)</span></span>
-<span class="r-in"></span>
-<span class="r-in"><span class="va">ds_syn_dfop_sfo</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply</a></span><span class="op">(</span><span class="va">ds_mean_dfop_sfo</span>, <span class="kw">function</span><span class="op">(</span><span class="va">ds</span><span class="op">)</span> <span class="op">{</span></span>
-<span class="r-in"> <span class="fu"><a href="add_err.html">add_err</a></span><span class="op">(</span><span class="va">ds</span>,</span>
-<span class="r-in"> sdfunc <span class="op">=</span> <span class="kw">function</span><span class="op">(</span><span class="va">value</span><span class="op">)</span> <span class="fu"><a href="https://rdrr.io/r/base/MathFun.html" class="external-link">sqrt</a></span><span class="op">(</span><span class="fl">1</span><span class="op">^</span><span class="fl">2</span> <span class="op">+</span> <span class="va">value</span><span class="op">^</span><span class="fl">2</span> <span class="op">*</span> <span class="fl">0.07</span><span class="op">^</span><span class="fl">2</span><span class="op">)</span>,</span>
-<span class="r-in"> n <span class="op">=</span> <span class="fl">1</span><span class="op">)</span><span class="op">[[</span><span class="fl">1</span><span class="op">]</span><span class="op">]</span></span>
-<span class="r-in"><span class="op">}</span><span class="op">)</span></span>
-<span class="r-in"></span>
-<span class="r-in"><span class="co"># \dontrun{</span></span>
-<span class="r-in"><span class="co"># Evaluate using mmkin and saem</span></span>
-<span class="r-in"><span class="va">f_mmkin_dfop_sfo</span> <span class="op">&lt;-</span> <span class="fu"><a href="mmkin.html">mmkin</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span><span class="va">dfop_sfo</span><span class="op">)</span>, <span class="va">ds_syn_dfop_sfo</span>,</span>
-<span class="r-in"> quiet <span class="op">=</span> <span class="cn">TRUE</span>, error_model <span class="op">=</span> <span class="st">"tc"</span>, cores <span class="op">=</span> <span class="fl">5</span><span class="op">)</span></span>
-<span class="r-in"><span class="va">f_saem_dfop_sfo</span> <span class="op">&lt;-</span> <span class="fu"><a href="saem.html">saem</a></span><span class="op">(</span><span class="va">f_mmkin_dfop_sfo</span><span class="op">)</span></span>
-<span class="r-in"><span class="fu"><a href="https://rdrr.io/pkg/saemix/man/summary-methods.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">f_saem_dfop_sfo</span>, data <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> saemix version used for fitting: 3.0 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> mkin version used for pre-fitting: 1.1.0 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> R version used for fitting: 4.2.0 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> Date of fit: Wed May 18 20:42:18 2022 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> Date of summary: Wed May 18 20:42:18 2022 </span>
+ <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="co"># Generate five datasets following DFOP-SFO kinetics</span></span></span>
+<span class="r-in"><span><span class="va">sampling_times</span> <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">0</span>, <span class="fl">1</span>, <span class="fl">3</span>, <span class="fl">7</span>, <span class="fl">14</span>, <span class="fl">28</span>, <span class="fl">60</span>, <span class="fl">90</span>, <span class="fl">120</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="va">dfop_sfo</span> <span class="op">&lt;-</span> <span class="fu"><a href="mkinmod.html">mkinmod</a></span><span class="op">(</span>parent <span class="op">=</span> <span class="fu"><a href="mkinmod.html">mkinsub</a></span><span class="op">(</span><span class="st">"DFOP"</span>, <span class="st">"m1"</span><span class="op">)</span>,</span></span>
+<span class="r-in"><span> m1 <span class="op">=</span> <span class="fu"><a href="mkinmod.html">mkinsub</a></span><span class="op">(</span><span class="st">"SFO"</span><span class="op">)</span>, quiet <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/Random.html" class="external-link">set.seed</a></span><span class="op">(</span><span class="fl">1234</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="va">k1_in</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/Lognormal.html" class="external-link">rlnorm</a></span><span class="op">(</span><span class="fl">5</span>, <span class="fu"><a href="https://rdrr.io/r/base/Log.html" class="external-link">log</a></span><span class="op">(</span><span class="fl">0.1</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="va">k2_in</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/Lognormal.html" class="external-link">rlnorm</a></span><span class="op">(</span><span class="fl">5</span>, <span class="fu"><a href="https://rdrr.io/r/base/Log.html" class="external-link">log</a></span><span class="op">(</span><span class="fl">0.02</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="va">g_in</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/Logistic.html" class="external-link">plogis</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/stats/Normal.html" class="external-link">rnorm</a></span><span class="op">(</span><span class="fl">5</span>, <span class="fu"><a href="https://rdrr.io/r/stats/Logistic.html" class="external-link">qlogis</a></span><span class="op">(</span><span class="fl">0.5</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="va">f_parent_to_m1_in</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/Logistic.html" class="external-link">plogis</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/stats/Normal.html" class="external-link">rnorm</a></span><span class="op">(</span><span class="fl">5</span>, <span class="fu"><a href="https://rdrr.io/r/stats/Logistic.html" class="external-link">qlogis</a></span><span class="op">(</span><span class="fl">0.3</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="va">k_m1_in</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/Lognormal.html" class="external-link">rlnorm</a></span><span class="op">(</span><span class="fl">5</span>, <span class="fu"><a href="https://rdrr.io/r/base/Log.html" class="external-link">log</a></span><span class="op">(</span><span class="fl">0.02</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span></span></span>
+<span class="r-in"><span></span></span>
+<span class="r-in"><span><span class="va">pred_dfop_sfo</span> <span class="op">&lt;-</span> <span class="kw">function</span><span class="op">(</span><span class="va">k1</span>, <span class="va">k2</span>, <span class="va">g</span>, <span class="va">f_parent_to_m1</span>, <span class="va">k_m1</span><span class="op">)</span> <span class="op">{</span></span></span>
+<span class="r-in"><span> <span class="fu"><a href="mkinpredict.html">mkinpredict</a></span><span class="op">(</span><span class="va">dfop_sfo</span>,</span></span>
+<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span>k1 <span class="op">=</span> <span class="va">k1</span>, k2 <span class="op">=</span> <span class="va">k2</span>, g <span class="op">=</span> <span class="va">g</span>, f_parent_to_m1 <span class="op">=</span> <span class="va">f_parent_to_m1</span>, k_m1 <span class="op">=</span> <span class="va">k_m1</span><span class="op">)</span>,</span></span>
+<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span>parent <span class="op">=</span> <span class="fl">100</span>, m1 <span class="op">=</span> <span class="fl">0</span><span class="op">)</span>,</span></span>
+<span class="r-in"><span> <span class="va">sampling_times</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="op">}</span></span></span>
+<span class="r-in"><span></span></span>
+<span class="r-in"><span><span class="va">ds_mean_dfop_sfo</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply</a></span><span class="op">(</span><span class="fl">1</span><span class="op">:</span><span class="fl">5</span>, <span class="kw">function</span><span class="op">(</span><span class="va">i</span><span class="op">)</span> <span class="op">{</span></span></span>
+<span class="r-in"><span> <span class="fu"><a href="mkinpredict.html">mkinpredict</a></span><span class="op">(</span><span class="va">dfop_sfo</span>,</span></span>
+<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span>k1 <span class="op">=</span> <span class="va">k1_in</span><span class="op">[</span><span class="va">i</span><span class="op">]</span>, k2 <span class="op">=</span> <span class="va">k2_in</span><span class="op">[</span><span class="va">i</span><span class="op">]</span>, g <span class="op">=</span> <span class="va">g_in</span><span class="op">[</span><span class="va">i</span><span class="op">]</span>,</span></span>
+<span class="r-in"><span> f_parent_to_m1 <span class="op">=</span> <span class="va">f_parent_to_m1_in</span><span class="op">[</span><span class="va">i</span><span class="op">]</span>, k_m1 <span class="op">=</span> <span class="va">k_m1_in</span><span class="op">[</span><span class="va">i</span><span class="op">]</span><span class="op">)</span>,</span></span>
+<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span>parent <span class="op">=</span> <span class="fl">100</span>, m1 <span class="op">=</span> <span class="fl">0</span><span class="op">)</span>,</span></span>
+<span class="r-in"><span> <span class="va">sampling_times</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="op">}</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/names.html" class="external-link">names</a></span><span class="op">(</span><span class="va">ds_mean_dfop_sfo</span><span class="op">)</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/paste.html" class="external-link">paste</a></span><span class="op">(</span><span class="st">"ds"</span>, <span class="fl">1</span><span class="op">:</span><span class="fl">5</span><span class="op">)</span></span></span>
+<span class="r-in"><span></span></span>
+<span class="r-in"><span><span class="va">ds_syn_dfop_sfo</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/lapply.html" class="external-link">lapply</a></span><span class="op">(</span><span class="va">ds_mean_dfop_sfo</span>, <span class="kw">function</span><span class="op">(</span><span class="va">ds</span><span class="op">)</span> <span class="op">{</span></span></span>
+<span class="r-in"><span> <span class="fu"><a href="add_err.html">add_err</a></span><span class="op">(</span><span class="va">ds</span>,</span></span>
+<span class="r-in"><span> sdfunc <span class="op">=</span> <span class="kw">function</span><span class="op">(</span><span class="va">value</span><span class="op">)</span> <span class="fu"><a href="https://rdrr.io/r/base/MathFun.html" class="external-link">sqrt</a></span><span class="op">(</span><span class="fl">1</span><span class="op">^</span><span class="fl">2</span> <span class="op">+</span> <span class="va">value</span><span class="op">^</span><span class="fl">2</span> <span class="op">*</span> <span class="fl">0.07</span><span class="op">^</span><span class="fl">2</span><span class="op">)</span>,</span></span>
+<span class="r-in"><span> n <span class="op">=</span> <span class="fl">1</span><span class="op">)</span><span class="op">[[</span><span class="fl">1</span><span class="op">]</span><span class="op">]</span></span></span>
+<span class="r-in"><span><span class="op">}</span><span class="op">)</span></span></span>
+<span class="r-in"><span></span></span>
+<span class="r-in"><span><span class="co"># \dontrun{</span></span></span>
+<span class="r-in"><span><span class="co"># Evaluate using mmkin and saem</span></span></span>
+<span class="r-in"><span><span class="va">f_mmkin_dfop_sfo</span> <span class="op">&lt;-</span> <span class="fu"><a href="mmkin.html">mmkin</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span><span class="va">dfop_sfo</span><span class="op">)</span>, <span class="va">ds_syn_dfop_sfo</span>,</span></span>
+<span class="r-in"><span> quiet <span class="op">=</span> <span class="cn">TRUE</span>, error_model <span class="op">=</span> <span class="st">"tc"</span>, cores <span class="op">=</span> <span class="fl">5</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="va">f_saem_dfop_sfo</span> <span class="op">&lt;-</span> <span class="fu"><a href="saem.html">saem</a></span><span class="op">(</span><span class="va">f_mmkin_dfop_sfo</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/print.html" class="external-link">print</a></span><span class="op">(</span><span class="va">f_saem_dfop_sfo</span><span class="op">)</span></span></span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Kinetic nonlinear mixed-effects model fit by SAEM</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Structural model:</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> time)) / (g * exp(-k1 * time) + (1 - g) * exp(-k2 * time)))</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> * parent</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> d_m1/dt = + f_parent_to_m1 * ((k1 * g * exp(-k1 * time) + k2 * (1 - g)</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> * exp(-k2 * time)) / (g * exp(-k1 * time) + (1 - g) *</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> exp(-k2 * time))) * parent - k_m1 * m1</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Data:</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 171 observations of 2 variable(s) grouped in 5 datasets</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Likelihood computed by importance sampling</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> AIC BIC logLik</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 828.1 822.7 -400.1</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Fitted parameters:</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> estimate lower upper</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> parent_0 100.74378 97.81291 103.67465</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> log_k_m1 -4.06168 -4.17104 -3.95231</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> f_parent_qlogis -0.92584 -1.31273 -0.53894</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> log_k1 -2.81914 -3.60206 -2.03623</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> log_k2 -3.63916 -4.32672 -2.95161</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> g_qlogis -0.02927 -1.15247 1.09394</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> a.1 0.86164 0.67928 1.04400</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> b.1 0.07973 0.06437 0.09509</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> SD.parent_0 0.73313 -7.46512 8.93137</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> SD.log_k_m1 0.06488 -0.06041 0.19017</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> SD.f_parent_qlogis 0.41955 0.15206 0.68705</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> SD.log_k1 0.81750 0.29140 1.34361</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> SD.log_k2 0.75265 0.27939 1.22590</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> SD.g_qlogis 0.34411 -1.70964 2.39786</span>
+<span class="r-in"><span><span class="fu"><a href="illparms.html">illparms</a></span><span class="op">(</span><span class="va">f_saem_dfop_sfo</span><span class="op">)</span></span></span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [1] "sd(parent_0)" "sd(log_k_m1)" "sd(g_qlogis)"</span>
+<span class="r-in"><span><span class="va">f_saem_dfop_sfo_2</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/stats/update.html" class="external-link">update</a></span><span class="op">(</span><span class="va">f_saem_dfop_sfo</span>, covariance.model <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/diag.html" class="external-link">diag</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">0</span>, <span class="fl">0</span>, <span class="fl">1</span>, <span class="fl">1</span>, <span class="fl">1</span>, <span class="fl">0</span><span class="op">)</span><span class="op">)</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="fu"><a href="illparms.html">illparms</a></span><span class="op">(</span><span class="va">f_saem_dfop_sfo_2</span><span class="op">)</span></span></span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> character(0)</span>
+<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/pkg/nlme/man/intervals.html" class="external-link">intervals</a></span><span class="op">(</span><span class="va">f_saem_dfop_sfo_2</span><span class="op">)</span></span></span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Approximate 95% confidence intervals</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Fixed effects:</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> lower est. upper</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> parent_0 97.54844979 100.46239264 103.37633550</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> k_m1 0.01575805 0.01729111 0.01897331</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> f_parent_to_m1 0.21014925 0.28626877 0.37680664</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> k1 0.02651112 0.05601399 0.11834908</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> k2 0.01326524 0.02649799 0.05293107</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> g 0.31467778 0.51297098 0.70726363</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Random effects:</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> lower est. upper</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> sd(f_parent_qlogis) 0.1658367 0.4471180 0.7283993</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> sd(log_k1) 0.2768757 0.7929203 1.3089649</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> sd(log_k2) 0.2693629 0.7566116 1.2438602</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> lower est. upper</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> a.1 0.70273100 0.88750764 1.07228428</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> b.1 0.06781347 0.08328016 0.09874685</span>
+<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/summary.html" class="external-link">summary</a></span><span class="op">(</span><span class="va">f_saem_dfop_sfo_2</span>, data <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> saemix version used for fitting: 3.1 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> mkin version used for pre-fitting: 1.1.2 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> R version used for fitting: 4.2.1 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Date of fit: Wed Aug 10 14:31:01 2022 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Date of summary: Wed Aug 10 14:31:01 2022 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Equations:</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *</span>
@@ -216,7 +305,7 @@ saemix authors for the parts inherited from saemix.</p>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Model predictions using solution type analytical </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> Fitted in 12.833 s</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> Fitted in 26.786 s</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Using 300, 100 iterations and 10 chains</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Variance model: Two-component variance function </span>
@@ -225,7 +314,7 @@ saemix authors for the parts inherited from saemix.</p>
<span class="r-out co"><span class="r-pr">#&gt;</span> parent_0 log_k_m1 f_parent_qlogis log_k1 log_k2 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 101.65645 -4.05368 -0.94311 -2.35943 -4.07006 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> g_qlogis </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> -0.01133 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> -0.01132 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Fixed degradation parameter values:</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> None</span>
@@ -234,233 +323,230 @@ saemix authors for the parts inherited from saemix.</p>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Likelihood computed by importance sampling</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> AIC BIC logLik</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 829.3 823.8 -400.6</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 825.6 821.3 -401.8</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Optimised parameters:</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> est. lower upper</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> parent_0 101.26516 98.412 104.1188</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> log_k_m1 -4.07510 -4.168 -3.9819</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> f_parent_qlogis -0.94320 -1.350 -0.5364</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> log_k1 -2.87697 -3.703 -2.0510</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> log_k2 -3.58133 -4.313 -2.8492</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> g_qlogis -0.03174 -1.564 1.5008</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> est. lower upper</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> parent_0 100.4624 97.5484 103.3763</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> log_k_m1 -4.0576 -4.1504 -3.9647</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> f_parent_qlogis -0.9136 -1.3240 -0.5031</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> log_k1 -2.8822 -3.6302 -2.1341</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> log_k2 -3.6307 -4.3226 -2.9388</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> g_qlogis 0.0519 -0.7783 0.8821</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Correlation: </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> parnt_0 lg_k_m1 f_prnt_ log_k1 log_k2 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> log_k_m1 -0.4167 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> f_parent_qlogis -0.2084 0.2383 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> log_k1 0.1324 -0.1242 -0.0500 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> log_k2 0.0173 0.0001 -0.0067 0.1137 </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> g_qlogis -0.0849 0.0691 0.0399 -0.3916 -0.3012</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> log_k_m1 -0.4102 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> f_parent_qlogis -0.2113 0.2439 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> log_k1 0.1308 -0.1305 -0.0504 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> log_k2 -0.0383 0.0592 0.0151 0.0001 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> g_qlogis -0.0029 -0.0118 0.0131 -0.2547 -0.1942</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Random effects:</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> est. lower upper</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> SD.parent_0 0.16032 -34.0484 34.3690</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> SD.log_k_m1 0.01463 -0.3605 0.3898</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> SD.f_parent_qlogis 0.44391 0.1646 0.7232</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> SD.log_k1 0.84861 0.3044 1.3928</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> SD.log_k2 0.79185 0.2944 1.2893</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> SD.g_qlogis 0.34997 -3.0572 3.7572</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> est. lower upper</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> SD.f_parent_qlogis 0.4471 0.1658 0.7284</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> SD.log_k1 0.7929 0.2769 1.3090</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> SD.log_k2 0.7566 0.2694 1.2439</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Variance model:</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> est. lower upper</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> a.1 0.87200 0.69118 1.0528</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> b.1 0.07963 0.06435 0.0949</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> est. lower upper</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> a.1 0.88751 0.70273 1.07228</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> b.1 0.08328 0.06781 0.09875</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Backtransformed parameters:</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> est. lower upper</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> parent_0 101.26516 98.41151 104.11881</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> k_m1 0.01699 0.01548 0.01865</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> f_parent_to_m1 0.28025 0.20588 0.36902</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> k1 0.05630 0.02465 0.12861</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> k2 0.02784 0.01339 0.05789</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> g 0.49207 0.17303 0.81770</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> parent_0 100.46239 97.54845 103.37634</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> k_m1 0.01729 0.01576 0.01897</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> f_parent_to_m1 0.28627 0.21015 0.37681</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> k1 0.05601 0.02651 0.11835</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> k2 0.02650 0.01327 0.05293</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> g 0.51297 0.31468 0.70726</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Resulting formation fractions:</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> ff</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> parent_m1 0.2803</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> parent_sink 0.7197</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> parent_m1 0.2863</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> parent_sink 0.7137</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Estimated disappearance times:</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> DT50 DT90 DT50back DT50_k1 DT50_k2</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> parent 17.28 63.65 19.16 12.31 24.9</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> m1 40.80 135.52 NA NA NA</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> parent 17.44 65.15 19.61 12.37 26.16</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> m1 40.09 133.17 NA NA NA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Data:</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds name time observed predicted residual std standardized</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 0 89.8 1.012e+02 -11.441861 8.1085 -1.411097</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 0 104.1 1.012e+02 2.858139 8.1085 0.352487</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 1 88.7 9.642e+01 -7.717294 7.7267 -0.998787</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 1 95.5 9.642e+01 -0.917294 7.7267 -0.118718</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 3 81.8 8.761e+01 -5.811045 7.0304 -0.826561</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 3 94.5 8.761e+01 6.888955 7.0304 0.979883</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 7 71.5 7.288e+01 -1.380912 5.8683 -0.235315</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 7 70.3 7.288e+01 -2.580912 5.8683 -0.439802</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 14 54.2 5.406e+01 0.139892 4.3920 0.031851</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 14 49.6 5.406e+01 -4.460108 4.3920 -1.015504</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 28 31.5 3.222e+01 -0.722286 2.7099 -0.266540</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 28 28.8 3.222e+01 -3.422286 2.7099 -1.262902</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 60 12.1 1.280e+01 -0.696320 1.3411 -0.519211</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 60 13.6 1.280e+01 0.803680 1.3411 0.599263</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 90 6.2 6.147e+00 0.052772 1.0000 0.052772</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 90 8.3 6.147e+00 2.152772 1.0000 2.152793</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 120 2.2 3.047e+00 -0.847292 0.9051 -0.936096</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 120 2.4 3.047e+00 -0.647292 0.9051 -0.715134</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 1 0.3 1.172e+00 -0.871912 0.8770 -0.994217</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 1 0.2 1.172e+00 -0.971912 0.8770 -1.108244</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 3 2.2 3.253e+00 -1.053335 0.9097 -1.157932</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 3 3.0 3.253e+00 -0.253335 0.9097 -0.278492</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 7 6.5 6.524e+00 -0.024120 1.0150 -0.023763</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 7 5.0 6.524e+00 -1.524120 1.0150 -1.501571</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 14 10.2 1.012e+01 0.076122 1.1875 0.064101</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 14 9.5 1.012e+01 -0.623878 1.1875 -0.525359</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 28 12.2 1.268e+01 -0.478789 1.3340 -0.358908</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 28 13.4 1.268e+01 0.721211 1.3340 0.540631</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 60 11.8 1.085e+01 0.954822 1.2272 0.778023</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 60 13.2 1.085e+01 2.354822 1.2272 1.918794</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 90 6.6 7.751e+00 -1.151363 1.0683 -1.077718</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 90 9.3 7.751e+00 1.548637 1.0683 1.449581</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 120 3.5 5.236e+00 -1.735804 0.9665 -1.795893</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 120 5.4 5.236e+00 0.164196 0.9665 0.169880</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 0 118.0 1.013e+02 16.726081 8.1110 2.062142</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 0 99.8 1.013e+02 -1.473919 8.1110 -0.181718</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 1 90.2 9.591e+01 -5.708953 7.6864 -0.742730</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 1 94.6 9.591e+01 -1.308953 7.6864 -0.170294</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 3 96.1 8.654e+01 9.564450 6.9454 1.377088</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 3 78.4 8.654e+01 -8.135550 6.9454 -1.171355</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 7 77.9 7.206e+01 5.840823 5.8037 1.006405</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 7 77.7 7.206e+01 5.640823 5.8037 0.971944</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 14 56.0 5.562e+01 0.376382 4.5141 0.083379</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 14 54.7 5.562e+01 -0.923618 4.5141 -0.204607</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 28 36.6 3.849e+01 -1.891356 3.1865 -0.593546</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 28 36.8 3.849e+01 -1.691356 3.1865 -0.530782</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 60 22.1 2.105e+01 1.052796 1.8892 0.557274</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 60 24.7 2.105e+01 3.652796 1.8892 1.933527</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 90 12.4 1.249e+01 -0.085726 1.3224 -0.064825</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 90 10.8 1.249e+01 -1.685726 1.3224 -1.274728</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 120 6.8 7.425e+00 -0.625179 1.0535 -0.593407</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 120 7.9 7.425e+00 0.474821 1.0535 0.450690</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 1 1.3 1.420e+00 -0.119671 0.8793 -0.136098</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 3 3.7 3.831e+00 -0.130721 0.9238 -0.141501</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 3 4.7 3.831e+00 0.869279 0.9238 0.940968</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 7 8.1 7.307e+00 0.793062 1.0483 0.756531</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 7 7.9 7.307e+00 0.593062 1.0483 0.565743</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 14 10.1 1.060e+01 -0.500946 1.2136 -0.412765</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 14 10.3 1.060e+01 -0.300946 1.2136 -0.247970</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 28 10.7 1.236e+01 -1.663249 1.3151 -1.264727</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 28 12.2 1.236e+01 -0.163249 1.3151 -0.124134</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 60 10.7 1.063e+01 0.065269 1.2155 0.053697</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 60 12.5 1.063e+01 1.865269 1.2155 1.534560</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 90 9.1 8.134e+00 0.965918 1.0862 0.889243</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 90 7.4 8.134e+00 -0.734082 1.0862 -0.675811</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 120 6.1 5.918e+00 0.181998 0.9912 0.183617</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 120 4.5 5.918e+00 -1.418002 0.9912 -1.430615</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 0 106.2 1.013e+02 4.927395 8.1109 0.607501</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 0 106.9 1.013e+02 5.627395 8.1109 0.693805</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 1 107.4 9.362e+01 13.778324 7.5055 1.835758</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 1 96.1 9.362e+01 2.478324 7.5055 0.330200</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 3 79.4 8.111e+01 -1.714426 6.5174 -0.263054</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 3 82.6 8.111e+01 1.485574 6.5174 0.227940</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 7 63.9 6.406e+01 -0.160919 5.1749 -0.031096</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 7 62.4 6.406e+01 -1.660919 5.1749 -0.320957</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 14 51.0 4.811e+01 2.894697 3.9284 0.736859</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 14 47.1 4.811e+01 -1.005303 3.9284 -0.255905</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 28 36.1 3.433e+01 1.766324 2.8695 0.615541</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 28 36.6 3.433e+01 2.266324 2.8695 0.789785</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 60 20.1 1.973e+01 0.371727 1.7967 0.206897</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 60 19.8 1.973e+01 0.071727 1.7967 0.039922</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 90 11.3 1.194e+01 -0.639567 1.2900 -0.495771</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 90 10.7 1.194e+01 -1.239567 1.2900 -0.960871</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 120 8.2 7.228e+00 0.972496 1.0448 0.930805</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 120 7.3 7.228e+00 0.072496 1.0448 0.069388</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 0 0.8 2.046e-12 0.800000 0.8720 0.917426</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 1 1.8 1.802e+00 -0.002337 0.8837 -0.002644</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 1 2.3 1.802e+00 0.497663 0.8837 0.563136</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 3 4.2 4.662e+00 -0.461759 0.9477 -0.487230</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 3 4.1 4.662e+00 -0.561759 0.9477 -0.592746</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 7 6.8 8.261e+00 -1.460846 1.0923 -1.337436</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 7 10.1 8.261e+00 1.839154 1.0923 1.683785</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 14 11.4 1.088e+01 0.520066 1.2292 0.423096</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 14 12.8 1.088e+01 1.920066 1.2292 1.562058</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 28 11.5 1.143e+01 0.066711 1.2606 0.052919</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 28 10.6 1.143e+01 -0.833289 1.2606 -0.661009</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 60 7.5 9.224e+00 -1.723819 1.1401 -1.511997</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 60 8.6 9.224e+00 -0.623819 1.1401 -0.547165</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 90 7.3 6.951e+00 0.348894 1.0328 0.337804</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 90 8.1 6.951e+00 1.148894 1.0328 1.112374</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 120 5.3 5.028e+00 0.272355 0.9595 0.283849</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 120 3.8 5.028e+00 -1.227645 0.9595 -1.279452</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 0 104.7 1.012e+02 3.450870 8.1091 0.425557</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 0 88.3 1.012e+02 -12.949130 8.1091 -1.596872</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 1 94.2 9.787e+01 -3.670543 7.8417 -0.468083</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 1 94.6 9.787e+01 -3.270543 7.8417 -0.417073</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 3 78.1 9.154e+01 -13.439273 7.3409 -1.830749</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 3 96.5 9.154e+01 4.960727 7.3409 0.675769</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 7 76.2 8.040e+01 -4.195825 6.4607 -0.649438</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 7 77.8 8.040e+01 -2.595825 6.4607 -0.401787</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 14 70.8 6.485e+01 5.950631 5.2368 1.136312</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 14 67.3 6.485e+01 2.450631 5.2368 0.467964</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 28 43.1 4.403e+01 -0.927716 3.6126 -0.256803</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 28 45.1 4.403e+01 1.072284 3.6126 0.296821</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 60 21.3 2.121e+01 0.085295 1.9010 0.044868</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 60 23.5 2.121e+01 2.285295 1.9010 1.202136</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 90 11.8 1.187e+01 -0.069302 1.2859 -0.053892</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 90 12.1 1.187e+01 0.230698 1.2859 0.179402</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 120 7.0 6.896e+00 0.104203 1.0305 0.101121</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 120 6.2 6.896e+00 -0.695797 1.0305 -0.675218</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 0 1.6 4.661e-12 1.600000 0.8720 1.834853</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 1 0.9 6.932e-01 0.206778 0.8737 0.236656</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 3 3.7 1.958e+00 1.742149 0.8858 1.966684</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 3 2.0 1.958e+00 0.042149 0.8858 0.047581</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 7 3.6 4.056e+00 -0.456030 0.9299 -0.490412</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 7 3.8 4.056e+00 -0.256030 0.9299 -0.275333</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 14 7.1 6.624e+00 0.475608 1.0191 0.466682</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 14 6.6 6.624e+00 -0.024392 1.0191 -0.023934</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 28 9.5 9.013e+00 0.487100 1.1293 0.431311</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 28 9.3 9.013e+00 0.287100 1.1293 0.254218</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 60 8.3 8.710e+00 -0.409941 1.1142 -0.367933</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 60 9.0 8.710e+00 0.290059 1.1142 0.260335</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 90 6.6 6.696e+00 -0.095953 1.0221 -0.093880</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 90 7.7 6.696e+00 1.004047 1.0221 0.982349</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 120 3.7 4.803e+00 -1.102994 0.9522 -1.158384</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 120 3.5 4.803e+00 -1.302994 0.9522 -1.368427</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 0 110.4 1.013e+02 9.136362 8.1102 1.126526</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 0 112.1 1.013e+02 10.836362 8.1102 1.336138</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 1 93.5 9.462e+01 -1.119415 7.5844 -0.147594</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 1 91.0 9.462e+01 -3.619415 7.5844 -0.477216</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 3 71.0 8.313e+01 -12.125525 6.6761 -1.816251</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 3 89.7 8.313e+01 6.574475 6.6761 0.984774</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 7 60.4 6.580e+01 -5.399792 5.3114 -1.016637</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 7 59.1 6.580e+01 -6.699792 5.3114 -1.261392</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 14 56.5 4.728e+01 9.217968 3.8645 2.385273</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 14 47.0 4.728e+01 -0.282032 3.8645 -0.072979</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 28 30.2 3.077e+01 -0.574817 2.6010 -0.220999</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 28 23.9 3.077e+01 -6.874817 2.6010 -2.643147</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 60 17.0 1.796e+01 -0.957722 1.6748 -0.571838</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 60 18.7 1.796e+01 0.742278 1.6748 0.443201</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 90 11.3 1.186e+01 -0.560382 1.2854 -0.435957</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 90 11.9 1.186e+01 0.039618 1.2854 0.030821</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 120 9.0 7.875e+00 1.125373 1.0740 1.047800</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 120 8.1 7.875e+00 0.225373 1.0740 0.209838</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 0 0.7 7.105e-15 0.700000 0.8720 0.802748</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 1 3.0 3.133e+00 -0.132776 0.9070 -0.146393</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 1 2.6 3.133e+00 -0.532776 0.9070 -0.587416</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 3 5.1 8.401e+00 -3.300544 1.0990 -3.003203</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 3 7.5 8.401e+00 -0.900544 1.0990 -0.819415</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 7 16.5 1.580e+01 0.697935 1.5309 0.455905</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 7 19.0 1.580e+01 3.197935 1.5309 2.088955</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 14 22.9 2.230e+01 0.604922 1.9779 0.305846</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 14 23.2 2.230e+01 0.904922 1.9779 0.457525</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 28 22.2 2.446e+01 -2.255019 2.1336 -1.056917</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 28 24.4 2.446e+01 -0.055019 2.1336 -0.025787</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 60 15.5 1.874e+01 -3.242459 1.7285 -1.875916</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 60 19.8 1.874e+01 1.057541 1.7285 0.611838</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 90 14.9 1.352e+01 1.376176 1.3856 0.993173</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 90 14.2 1.352e+01 0.676176 1.3856 0.487989</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 120 10.9 9.609e+00 1.291013 1.1601 1.112858</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 120 10.4 9.609e+00 0.791013 1.1601 0.681856</span>
-<span class="r-in"><span class="co"># }</span></span>
-<span class="r-in"></span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds name time observed predicted residual std standardized</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 0 89.8 1.005e+02 -10.662393 8.4135 -1.267301</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 0 104.1 1.005e+02 3.637607 8.4135 0.432355</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 1 88.7 9.576e+01 -7.063498 8.0244 -0.880249</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 1 95.5 9.576e+01 -0.263498 8.0244 -0.032837</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 3 81.8 8.717e+01 -5.369491 7.3135 -0.734185</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 3 94.5 8.717e+01 7.330509 7.3135 1.002320</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 7 71.5 7.274e+01 -1.238672 6.1224 -0.202319</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 7 70.3 7.274e+01 -2.438672 6.1224 -0.398322</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 14 54.2 5.418e+01 0.022691 4.5984 0.004935</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 14 49.6 5.418e+01 -4.577309 4.5984 -0.995423</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 28 31.5 3.241e+01 -0.914545 2.8416 -0.321837</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 28 28.8 3.241e+01 -3.614545 2.8416 -1.271993</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 60 12.1 1.283e+01 -0.730904 1.3891 -0.526186</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 60 13.6 1.283e+01 0.769096 1.3891 0.553681</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 90 6.2 6.128e+00 0.071981 1.0238 0.070309</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 90 8.3 6.128e+00 2.171981 1.0238 2.121538</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 120 2.2 3.022e+00 -0.822164 0.9225 -0.891230</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 parent 120 2.4 3.022e+00 -0.622164 0.9225 -0.674429</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 1 0.3 1.163e+00 -0.863423 0.8928 -0.967116</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 1 0.2 1.163e+00 -0.963423 0.8928 -1.079126</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 3 2.2 3.233e+00 -1.032930 0.9274 -1.113734</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 3 3.0 3.233e+00 -0.232930 0.9274 -0.251152</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 7 6.5 6.495e+00 0.005314 1.0393 0.005113</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 7 5.0 6.495e+00 -1.494686 1.0393 -1.438116</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 14 10.2 1.010e+01 0.096372 1.2230 0.078801</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 14 9.5 1.010e+01 -0.603628 1.2230 -0.493572</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 28 12.2 1.269e+01 -0.492073 1.3802 -0.356526</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 28 13.4 1.269e+01 0.707927 1.3802 0.512922</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 60 11.8 1.086e+01 0.944360 1.2669 0.745420</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 60 13.2 1.086e+01 2.344360 1.2669 1.850494</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 90 6.6 7.723e+00 -1.123088 1.0961 -1.024658</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 90 9.3 7.723e+00 1.576912 1.0961 1.438708</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 120 3.5 5.184e+00 -1.683936 0.9869 -1.706219</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 1 m1 120 5.4 5.184e+00 0.216064 0.9869 0.218923</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 0 118.0 1.005e+02 17.537607 8.4135 2.084469</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 0 99.8 1.005e+02 -0.662393 8.4135 -0.078730</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 1 90.2 9.566e+01 -5.456414 8.0156 -0.680727</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 1 94.6 9.566e+01 -1.056414 8.0156 -0.131795</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 3 96.1 8.702e+01 9.082833 7.3009 1.244062</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 3 78.4 8.702e+01 -8.617167 7.3009 -1.180281</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 7 77.9 7.298e+01 4.919834 6.1423 0.800981</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 7 77.7 7.298e+01 4.719834 6.1423 0.768420</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 14 56.0 5.588e+01 0.124003 4.7372 0.026176</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 14 54.7 5.588e+01 -1.175997 4.7372 -0.248245</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 28 36.6 3.719e+01 -0.587869 3.2217 -0.182474</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 28 36.8 3.719e+01 -0.387869 3.2217 -0.120394</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 60 22.1 2.013e+01 1.973728 1.8966 1.040673</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 60 24.7 2.013e+01 4.573728 1.8966 2.411556</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 90 12.4 1.259e+01 -0.185933 1.3734 -0.135379</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 90 10.8 1.259e+01 -1.785933 1.3734 -1.300347</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 120 6.8 7.981e+00 -1.180542 1.1088 -1.064723</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 parent 120 7.9 7.981e+00 -0.080542 1.1088 -0.072640</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 1 1.3 1.306e+00 -0.006246 0.8941 -0.006986</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 3 3.7 3.589e+00 0.110879 0.9365 0.118399</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 3 4.7 3.589e+00 1.110879 0.9365 1.186217</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 7 8.1 7.062e+00 1.038045 1.0647 0.974978</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 7 7.9 7.062e+00 0.838045 1.0647 0.787129</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 14 10.1 1.065e+01 -0.553713 1.2549 -0.441227</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 14 10.3 1.065e+01 -0.353713 1.2549 -0.281857</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 28 10.7 1.284e+01 -2.144854 1.3900 -1.543111</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 28 12.2 1.284e+01 -0.644854 1.3900 -0.463939</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 60 10.7 1.082e+01 -0.115278 1.2645 -0.091165</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 60 12.5 1.082e+01 1.684722 1.2645 1.332337</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 90 9.1 8.014e+00 1.085607 1.1105 0.977610</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 90 7.4 8.014e+00 -0.614393 1.1105 -0.553272</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 120 6.1 5.736e+00 0.363593 1.0079 0.360737</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 2 m1 120 4.5 5.736e+00 -1.236407 1.0079 -1.226697</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 0 106.2 1.005e+02 5.737607 8.4135 0.681955</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 0 106.9 1.005e+02 6.437607 8.4135 0.765155</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 1 107.4 9.343e+01 13.972212 7.8311 1.784188</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 1 96.1 9.343e+01 2.672212 7.8311 0.341229</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 3 79.4 8.160e+01 -2.196297 6.8531 -0.320484</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 3 82.6 8.160e+01 1.003703 6.8531 0.146460</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 7 63.9 6.464e+01 -0.737220 5.4557 -0.135129</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 7 62.4 6.464e+01 -2.237220 5.4557 -0.410072</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 14 51.0 4.772e+01 3.278433 4.0722 0.805086</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 14 47.1 4.772e+01 -0.621567 4.0722 -0.152638</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 28 36.1 3.303e+01 3.070676 2.8903 1.062400</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 28 36.6 3.303e+01 3.570676 2.8903 1.235391</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 60 20.1 1.929e+01 0.808039 1.8355 0.440235</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 60 19.8 1.929e+01 0.508039 1.8355 0.276789</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 90 11.3 1.209e+01 -0.794443 1.3425 -0.591785</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 90 10.7 1.209e+01 -1.394443 1.3425 -1.038728</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 120 8.2 7.590e+00 0.610002 1.0896 0.559843</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 parent 120 7.3 7.590e+00 -0.289998 1.0896 -0.266152</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 0 0.8 -4.263e-14 0.800000 0.8875 0.901401</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 1 1.8 1.692e+00 0.107665 0.8986 0.119811</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 1 2.3 1.692e+00 0.607665 0.8986 0.676214</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 3 4.2 4.455e+00 -0.255347 0.9619 -0.265449</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 3 4.1 4.455e+00 -0.355347 0.9619 -0.369404</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 7 6.8 8.124e+00 -1.324338 1.1160 -1.186685</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 7 10.1 8.124e+00 1.975662 1.1160 1.770309</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 14 11.4 1.104e+01 0.361860 1.2778 0.283196</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 14 12.8 1.104e+01 1.761860 1.2778 1.378852</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 28 11.5 1.177e+01 -0.272554 1.3225 -0.206097</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 28 10.6 1.177e+01 -1.172554 1.3225 -0.886648</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 60 7.5 9.242e+00 -1.741667 1.1747 -1.482591</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 60 8.6 9.242e+00 -0.641667 1.1747 -0.546218</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 90 7.3 6.837e+00 0.463318 1.0544 0.439398</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 90 8.1 6.837e+00 1.263318 1.0544 1.198095</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 120 5.3 4.906e+00 0.394322 0.9770 0.403595</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 3 m1 120 3.8 4.906e+00 -1.105678 0.9770 -1.131677</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 0 104.7 1.005e+02 4.237607 8.4135 0.503670</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 0 88.3 1.005e+02 -12.162393 8.4135 -1.445587</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 1 94.2 9.723e+01 -3.029220 8.1458 -0.371877</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 1 94.6 9.723e+01 -2.629220 8.1458 -0.322772</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 3 78.1 9.114e+01 -13.041804 7.6420 -1.706592</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 3 96.5 9.114e+01 5.358196 7.6420 0.701150</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 7 76.2 8.033e+01 -4.133084 6.7488 -0.612421</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 7 77.8 8.033e+01 -2.533084 6.7488 -0.375340</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 14 70.8 6.504e+01 5.757987 5.4889 1.049017</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 14 67.3 6.504e+01 2.257987 5.4889 0.411371</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 28 43.1 4.418e+01 -1.080806 3.7849 -0.285557</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 28 45.1 4.418e+01 0.919194 3.7849 0.242858</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 60 21.3 2.110e+01 0.200596 1.9686 0.101899</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 60 23.5 2.110e+01 2.400596 1.9686 1.219459</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 90 11.8 1.183e+01 -0.034206 1.3263 -0.025791</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 90 12.1 1.183e+01 0.265794 1.3263 0.200408</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 120 7.0 6.985e+00 0.014647 1.0612 0.013803</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 parent 120 6.2 6.985e+00 -0.785353 1.0612 -0.740078</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 0 1.6 -1.705e-13 1.600000 0.8875 1.802801</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 1 0.9 6.803e-01 0.219655 0.8893 0.246994</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 3 3.7 1.927e+00 1.773027 0.9019 1.965880</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 3 2.0 1.927e+00 0.073027 0.9019 0.080970</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 7 3.6 4.013e+00 -0.412926 0.9483 -0.435417</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 7 3.8 4.013e+00 -0.212926 0.9483 -0.224523</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 14 7.1 6.604e+00 0.495843 1.0441 0.474896</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 14 6.6 6.604e+00 -0.004157 1.0441 -0.003981</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 28 9.5 9.077e+00 0.422700 1.1658 0.362576</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 28 9.3 9.077e+00 0.222700 1.1658 0.191024</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 60 8.3 8.818e+00 -0.518498 1.1520 -0.450099</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 60 9.0 8.818e+00 0.181502 1.1520 0.157559</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 90 6.6 6.738e+00 -0.137785 1.0500 -0.131222</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 90 7.7 6.738e+00 0.962215 1.0500 0.916383</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 120 3.7 4.794e+00 -1.093754 0.9732 -1.123914</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 4 m1 120 3.5 4.794e+00 -1.293754 0.9732 -1.329429</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 0 110.4 1.005e+02 9.937607 8.4135 1.181155</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 0 112.1 1.005e+02 11.637607 8.4135 1.383212</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 1 93.5 9.372e+01 -0.215694 7.8550 -0.027460</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 1 91.0 9.372e+01 -2.715694 7.8550 -0.345730</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 3 71.0 8.226e+01 -11.257156 6.9076 -1.629667</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 3 89.7 8.226e+01 7.442844 6.9076 1.077480</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 7 60.4 6.553e+01 -5.128464 5.5289 -0.927571</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 7 59.1 6.553e+01 -6.428464 5.5289 -1.162699</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 14 56.5 4.835e+01 8.146351 4.1235 1.975572</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 14 47.0 4.835e+01 -1.353649 4.1235 -0.328273</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 28 30.2 3.300e+01 -2.803303 2.8883 -0.970586</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 28 23.9 3.300e+01 -9.103303 2.8883 -3.151832</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 60 17.0 1.891e+01 -1.905909 1.8074 -1.054506</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 60 18.7 1.891e+01 -0.205909 1.8074 -0.113926</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 90 11.3 1.172e+01 -0.423434 1.3194 -0.320923</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 90 11.9 1.172e+01 0.176566 1.3194 0.133820</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 120 9.0 7.281e+00 1.719138 1.0749 1.599402</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 parent 120 8.1 7.281e+00 0.819138 1.0749 0.762086</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 0 0.7 -2.842e-13 0.700000 0.8875 0.788726</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 1 3.0 3.252e+00 -0.252227 0.9279 -0.271821</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 1 2.6 3.252e+00 -0.652227 0.9279 -0.702895</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 3 5.1 8.615e+00 -3.515326 1.1413 -3.080237</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 3 7.5 8.615e+00 -1.115326 1.1413 -0.977283</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 7 16.5 1.588e+01 0.619041 1.5928 0.388661</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 7 19.0 1.588e+01 3.119041 1.5928 1.958272</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 14 22.9 2.189e+01 1.014705 2.0272 0.500543</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 14 23.2 2.189e+01 1.314705 2.0272 0.648529</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 28 22.2 2.369e+01 -1.487604 2.1632 -0.687701</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 28 24.4 2.369e+01 0.712396 2.1632 0.329332</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 60 15.5 1.869e+01 -3.193942 1.7920 -1.782295</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 60 19.8 1.869e+01 1.106058 1.7920 0.617206</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 90 14.9 1.380e+01 1.103454 1.4518 0.760041</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 90 14.2 1.380e+01 0.403454 1.4518 0.277892</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 120 10.9 9.864e+00 1.035963 1.2093 0.856637</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> ds 5 m1 120 10.4 9.864e+00 0.535963 1.2093 0.443187</span>
+<span class="r-in"><span><span class="co"># }</span></span></span>
+<span class="r-in"><span></span></span>
</code></pre></div>
</div>
</div>
@@ -475,7 +561,7 @@ saemix authors for the parts inherited from saemix.</p>
</div>
<div class="pkgdown">
- <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.3.</p>
+ <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.6.</p>
</div>
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