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authorJohannes Ranke <jranke@uni-bremen.de>2016-03-24 07:26:55 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2016-03-24 08:28:23 +0100
commitd432a48c8e7cc2df95d4952af415f18809f60409 (patch)
treed55d27b5dc1cf393b532344db6d3764ed1e6b207 /inst/web
parenta04cc65a18998ff5d107a52d23c9a4aad21a03aa (diff)
Address feedback from CRAN submission
- Put the CRAN URL that the badge points to into canonical form. I had missed the requirement to use the canonical form before, as the R CMD check message complained about a (possibily) invalid URL, so I overlooked the explanation later in the check log. Thanks to Uwe for his patience. Fix checked with winbuilder. - Slightly reduced the build time for the compiled_models vignette by skipping the warm-up. 3 repetitions are necessary for the autoplot method to work
Diffstat (limited to 'inst/web')
-rw-r--r--inst/web/DFOP.solution.html4
-rw-r--r--inst/web/Extract.mmkin.html28
-rw-r--r--inst/web/FOCUS_2006_DFOP_ref_A_to_B.html4
-rw-r--r--inst/web/FOCUS_2006_FOMC_ref_A_to_F.html4
-rw-r--r--inst/web/FOCUS_2006_HS_ref_A_to_F.html4
-rw-r--r--inst/web/FOCUS_2006_SFO_ref_A_to_F.html4
-rw-r--r--inst/web/FOCUS_2006_datasets.html4
-rw-r--r--inst/web/FOMC.solution.html4
-rw-r--r--inst/web/HS.solution.html4
-rw-r--r--inst/web/IORE.solution.html4
-rw-r--r--inst/web/SFO.solution.html4
-rw-r--r--inst/web/SFORB.solution.html4
-rw-r--r--inst/web/endpoints.html4
-rw-r--r--inst/web/geometric_mean.html4
-rw-r--r--inst/web/ilr.html4
-rw-r--r--inst/web/mccall81_245T.html12
-rw-r--r--inst/web/mkin_long_to_wide.html4
-rw-r--r--inst/web/mkin_wide_to_long.html4
-rw-r--r--inst/web/mkinds.html4
-rw-r--r--inst/web/mkinerrmin.html4
-rw-r--r--inst/web/mkinfit.html14
-rw-r--r--inst/web/mkinmod.html4
-rw-r--r--inst/web/mkinparplot.html4
-rw-r--r--inst/web/mkinplot.html4
-rw-r--r--inst/web/mkinpredict.html10
-rw-r--r--inst/web/mkinresplot.html4
-rw-r--r--inst/web/mkinsub.html4
-rw-r--r--inst/web/mmkin.html4
-rw-r--r--inst/web/plot.mkinfit.html4
-rw-r--r--inst/web/plot.mmkin.html4
-rw-r--r--inst/web/print.mkinds.html4
-rw-r--r--inst/web/print.mkinmod.html4
-rw-r--r--inst/web/schaefer07_complex_case.html4
-rw-r--r--inst/web/summary.mkinfit.html12
-rw-r--r--inst/web/synthetic_data_for_UBA.html4
-rw-r--r--inst/web/transform_odeparms.html12
36 files changed, 104 insertions, 104 deletions
diff --git a/inst/web/DFOP.solution.html b/inst/web/DFOP.solution.html
index fb73ffb8..4746beef 100644
--- a/inst/web/DFOP.solution.html
+++ b/inst/web/DFOP.solution.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>DFOP.solution. mkin 0.9.42</title>
+<title>DFOP.solution. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/Extract.mmkin.html b/inst/web/Extract.mmkin.html
index fd99aa8b..2d77f552 100644
--- a/inst/web/Extract.mmkin.html
+++ b/inst/web/Extract.mmkin.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>[.mmkin. mkin 0.9.42</title>
+<title>[.mmkin. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
@@ -181,7 +181,7 @@ $calls
$time
user system elapsed
- 0.288 0.000 0.288
+ 0.276 0.000 0.273
$mkinmod
&lt;mkinmod&gt; model generated with
@@ -367,7 +367,7 @@ function (P)
}
return(mC)
}
-&lt;environment: 0x23d9ae8&gt;
+&lt;environment: 0x2b9db08&gt;
$cost_notrans
function (P)
@@ -389,7 +389,7 @@ function (P)
scaleVar = scaleVar)
return(mC)
}
-&lt;environment: 0x23d9ae8&gt;
+&lt;environment: 0x2b9db08&gt;
$hessian_notrans
parent_0 alpha beta
@@ -455,7 +455,7 @@ $bparms.state
99.66619
$date
-[1] &quot;Wed Mar 23 18:10:37 2016&quot;
+[1] &quot;Thu Mar 24 08:26:19 2016&quot;
attr(,&quot;class&quot;)
[1] &quot;mkinfit&quot; &quot;modFit&quot;
@@ -540,7 +540,7 @@ $calls
$time
user system elapsed
- 0.092 0.004 0.096
+ 0.088 0.004 0.090
$mkinmod
&lt;mkinmod&gt; model generated with
@@ -727,7 +727,7 @@ function (P)
}
return(mC)
}
-&lt;environment: 0x4023b58&gt;
+&lt;environment: 0x47e8398&gt;
$cost_notrans
function (P)
@@ -749,7 +749,7 @@ function (P)
scaleVar = scaleVar)
return(mC)
}
-&lt;environment: 0x4023b58&gt;
+&lt;environment: 0x47e8398&gt;
$hessian_notrans
parent_0 k_parent_sink
@@ -812,7 +812,7 @@ $bparms.state
99.17407
$date
-[1] &quot;Wed Mar 23 18:10:36 2016&quot;
+[1] &quot;Thu Mar 24 08:26:19 2016&quot;
attr(,&quot;class&quot;)
[1] &quot;mkinfit&quot; &quot;modFit&quot;
@@ -890,7 +890,7 @@ $calls
$time
user system elapsed
- 0.092 0.004 0.096
+ 0.088 0.004 0.090
$mkinmod
&lt;mkinmod&gt; model generated with
@@ -1077,7 +1077,7 @@ function (P)
}
return(mC)
}
-&lt;environment: 0x4023b58&gt;
+&lt;environment: 0x47e8398&gt;
$cost_notrans
function (P)
@@ -1099,7 +1099,7 @@ function (P)
scaleVar = scaleVar)
return(mC)
}
-&lt;environment: 0x4023b58&gt;
+&lt;environment: 0x47e8398&gt;
$hessian_notrans
parent_0 k_parent_sink
@@ -1162,7 +1162,7 @@ $bparms.state
99.17407
$date
-[1] &quot;Wed Mar 23 18:10:36 2016&quot;
+[1] &quot;Thu Mar 24 08:26:19 2016&quot;
attr(,&quot;class&quot;)
[1] &quot;mkinfit&quot; &quot;modFit&quot;
diff --git a/inst/web/FOCUS_2006_DFOP_ref_A_to_B.html b/inst/web/FOCUS_2006_DFOP_ref_A_to_B.html
index 76911ba7..e5dad993 100644
--- a/inst/web/FOCUS_2006_DFOP_ref_A_to_B.html
+++ b/inst/web/FOCUS_2006_DFOP_ref_A_to_B.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>FOCUS_2006_DFOP_ref_A_to_B. mkin 0.9.42</title>
+<title>FOCUS_2006_DFOP_ref_A_to_B. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/FOCUS_2006_FOMC_ref_A_to_F.html b/inst/web/FOCUS_2006_FOMC_ref_A_to_F.html
index ac250110..ce238c92 100644
--- a/inst/web/FOCUS_2006_FOMC_ref_A_to_F.html
+++ b/inst/web/FOCUS_2006_FOMC_ref_A_to_F.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>FOCUS_2006_FOMC_ref_A_to_F. mkin 0.9.42</title>
+<title>FOCUS_2006_FOMC_ref_A_to_F. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/FOCUS_2006_HS_ref_A_to_F.html b/inst/web/FOCUS_2006_HS_ref_A_to_F.html
index e7f5cdd5..a1abc1b6 100644
--- a/inst/web/FOCUS_2006_HS_ref_A_to_F.html
+++ b/inst/web/FOCUS_2006_HS_ref_A_to_F.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>FOCUS_2006_HS_ref_A_to_F. mkin 0.9.42</title>
+<title>FOCUS_2006_HS_ref_A_to_F. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/FOCUS_2006_SFO_ref_A_to_F.html b/inst/web/FOCUS_2006_SFO_ref_A_to_F.html
index 5bbdaa24..badb4c41 100644
--- a/inst/web/FOCUS_2006_SFO_ref_A_to_F.html
+++ b/inst/web/FOCUS_2006_SFO_ref_A_to_F.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>FOCUS_2006_SFO_ref_A_to_F. mkin 0.9.42</title>
+<title>FOCUS_2006_SFO_ref_A_to_F. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/FOCUS_2006_datasets.html b/inst/web/FOCUS_2006_datasets.html
index a2ea626c..7aa7f78b 100644
--- a/inst/web/FOCUS_2006_datasets.html
+++ b/inst/web/FOCUS_2006_datasets.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>FOCUS_2006_datasets. mkin 0.9.42</title>
+<title>FOCUS_2006_datasets. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/FOMC.solution.html b/inst/web/FOMC.solution.html
index 2f6a4097..5c17afe4 100644
--- a/inst/web/FOMC.solution.html
+++ b/inst/web/FOMC.solution.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>FOMC.solution. mkin 0.9.42</title>
+<title>FOMC.solution. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/HS.solution.html b/inst/web/HS.solution.html
index d009aa98..7f84cccd 100644
--- a/inst/web/HS.solution.html
+++ b/inst/web/HS.solution.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>HS.solution. mkin 0.9.42</title>
+<title>HS.solution. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/IORE.solution.html b/inst/web/IORE.solution.html
index 1491bccb..f735b3ad 100644
--- a/inst/web/IORE.solution.html
+++ b/inst/web/IORE.solution.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>IORE.solution. mkin 0.9.42</title>
+<title>IORE.solution. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/SFO.solution.html b/inst/web/SFO.solution.html
index 33ba8778..2f0d2ff1 100644
--- a/inst/web/SFO.solution.html
+++ b/inst/web/SFO.solution.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>SFO.solution. mkin 0.9.42</title>
+<title>SFO.solution. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/SFORB.solution.html b/inst/web/SFORB.solution.html
index 42c5a57f..0285188b 100644
--- a/inst/web/SFORB.solution.html
+++ b/inst/web/SFORB.solution.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>SFORB.solution. mkin 0.9.42</title>
+<title>SFORB.solution. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/endpoints.html b/inst/web/endpoints.html
index 9ddcc8b4..0566d93f 100644
--- a/inst/web/endpoints.html
+++ b/inst/web/endpoints.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>endpoints. mkin 0.9.42</title>
+<title>endpoints. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/geometric_mean.html b/inst/web/geometric_mean.html
index 9d47ebdc..82caad0e 100644
--- a/inst/web/geometric_mean.html
+++ b/inst/web/geometric_mean.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>geometric_mean. mkin 0.9.42</title>
+<title>geometric_mean. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/ilr.html b/inst/web/ilr.html
index cb0eef23..bcf1fc26 100644
--- a/inst/web/ilr.html
+++ b/inst/web/ilr.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>ilr. mkin 0.9.42</title>
+<title>ilr. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
René Lehmann and Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/mccall81_245T.html b/inst/web/mccall81_245T.html
index 5b191184..00338040 100644
--- a/inst/web/mccall81_245T.html
+++ b/inst/web/mccall81_245T.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mccall81_245T. mkin 0.9.42</title>
+<title>mccall81_245T. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
@@ -112,10 +112,10 @@
fixed_parms = &quot;k_phenol_sink&quot;, quiet = TRUE)
summary(fit.2, data = FALSE)
</div>
-<div class='output'>mkin version: 0.9.42
+<div class='output'>mkin version: 0.9.43
R version: 3.2.4
-Date of fit: Wed Mar 23 18:10:44 2016
-Date of summary: Wed Mar 23 18:10:44 2016
+Date of fit: Thu Mar 24 08:26:26 2016
+Date of summary: Thu Mar 24 08:26:26 2016
Equations:
d_T245 = - k_T245_sink * T245 - k_T245_phenol * T245
@@ -124,7 +124,7 @@ d_anisole = + k_phenol_anisole * phenol - k_anisole_sink * anisole
Model predictions using solution type deSolve
-Fitted with method Port using 246 model solutions performed in 1.482 s
+Fitted with method Port using 246 model solutions performed in 1.451 s
Weighting: none
diff --git a/inst/web/mkin_long_to_wide.html b/inst/web/mkin_long_to_wide.html
index de36532f..e58ce305 100644
--- a/inst/web/mkin_long_to_wide.html
+++ b/inst/web/mkin_long_to_wide.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkin_long_to_wide. mkin 0.9.42</title>
+<title>mkin_long_to_wide. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/mkin_wide_to_long.html b/inst/web/mkin_wide_to_long.html
index 08abc942..ab4f7dbb 100644
--- a/inst/web/mkin_wide_to_long.html
+++ b/inst/web/mkin_wide_to_long.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkin_wide_to_long. mkin 0.9.42</title>
+<title>mkin_wide_to_long. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/mkinds.html b/inst/web/mkinds.html
index 5e0f5001..f89128bf 100644
--- a/inst/web/mkinds.html
+++ b/inst/web/mkinds.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkinds. mkin 0.9.42</title>
+<title>mkinds. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/mkinerrmin.html b/inst/web/mkinerrmin.html
index f5ab043f..ba665376 100644
--- a/inst/web/mkinerrmin.html
+++ b/inst/web/mkinerrmin.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkinerrmin. mkin 0.9.42</title>
+<title>mkinerrmin. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/mkinfit.html b/inst/web/mkinfit.html
index 5b843ae2..43aee184 100644
--- a/inst/web/mkinfit.html
+++ b/inst/web/mkinfit.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkinfit. mkin 0.9.42</title>
+<title>mkinfit. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
@@ -323,17 +323,17 @@
fit &lt;- mkinfit(&quot;FOMC&quot;, FOCUS_2006_C, quiet = TRUE)
summary(fit)
</div>
-<div class='output'>mkin version: 0.9.42
+<div class='output'>mkin version: 0.9.43
R version: 3.2.4
-Date of fit: Wed Mar 23 18:10:46 2016
-Date of summary: Wed Mar 23 18:10:46 2016
+Date of fit: Thu Mar 24 08:26:29 2016
+Date of summary: Thu Mar 24 08:26:29 2016
Equations:
d_parent = - (alpha/beta) * 1/((time/beta) + 1) * parent
Model predictions using solution type analytical
-Fitted with method Port using 64 model solutions performed in 0.191 s
+Fitted with method Port using 64 model solutions performed in 0.205 s
Weighting: none
@@ -409,7 +409,7 @@ print(system.time(fit &lt;- mkinfit(SFO_SFO, FOCUS_2006_D,
solution_type = &quot;eigen&quot;, quiet = TRUE)))
</div>
<div class='output'> user system elapsed
- 1.204 1.280 0.942
+ 1.200 1.252 0.926
</div>
<div class='input'>coef(fit)
</div>
diff --git a/inst/web/mkinmod.html b/inst/web/mkinmod.html
index b3a396b9..0a361956 100644
--- a/inst/web/mkinmod.html
+++ b/inst/web/mkinmod.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkinmod. mkin 0.9.42</title>
+<title>mkinmod. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/mkinparplot.html b/inst/web/mkinparplot.html
index 8eee6868..59fddb39 100644
--- a/inst/web/mkinparplot.html
+++ b/inst/web/mkinparplot.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkinparplot. mkin 0.9.42</title>
+<title>mkinparplot. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/mkinplot.html b/inst/web/mkinplot.html
index c4542072..1b9a8a02 100644
--- a/inst/web/mkinplot.html
+++ b/inst/web/mkinplot.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkinplot. mkin 0.9.42</title>
+<title>mkinplot. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/mkinpredict.html b/inst/web/mkinpredict.html
index 76814960..c831f011 100644
--- a/inst/web/mkinpredict.html
+++ b/inst/web/mkinpredict.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkinpredict. mkin 0.9.42</title>
+<title>mkinpredict. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
@@ -304,7 +304,7 @@
201 20 4.978707 27.46227
</div>
<div class='output'> user system elapsed
- 0.004 0.024 0.004
+ 0.008 0.020 0.005
</div>
<div class='input'> system.time(
print(mkinpredict(SFO_SFO, c(k_parent_m1 = 0.05, k_parent_sink = 0.1, k_m1_sink = 0.01),
@@ -315,7 +315,7 @@
201 20 4.978707 27.46227
</div>
<div class='output'> user system elapsed
- 0.016 0.004 0.002
+ 0.008 0.012 0.003
</div>
<div class='input'> system.time(
print(mkinpredict(SFO_SFO, c(k_parent_m1 = 0.05, k_parent_sink = 0.1, k_m1_sink = 0.01),
@@ -326,7 +326,7 @@
201 20 4.978707 27.46227
</div>
<div class='output'> user system elapsed
- 0.048 0.008 0.055
+ 0.056 0.000 0.052
</div></pre>
</div>
<div class="span4">
diff --git a/inst/web/mkinresplot.html b/inst/web/mkinresplot.html
index 5a2388dc..b5f32633 100644
--- a/inst/web/mkinresplot.html
+++ b/inst/web/mkinresplot.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkinresplot. mkin 0.9.42</title>
+<title>mkinresplot. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/mkinsub.html b/inst/web/mkinsub.html
index 2b92fbbc..bd8e1de6 100644
--- a/inst/web/mkinsub.html
+++ b/inst/web/mkinsub.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mkinsub. mkin 0.9.42</title>
+<title>mkinsub. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/mmkin.html b/inst/web/mmkin.html
index 754be268..d2d1ac28 100644
--- a/inst/web/mmkin.html
+++ b/inst/web/mmkin.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>mmkin. mkin 0.9.42</title>
+<title>mmkin. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/plot.mkinfit.html b/inst/web/plot.mkinfit.html
index 1da0c8e8..11e11d7f 100644
--- a/inst/web/plot.mkinfit.html
+++ b/inst/web/plot.mkinfit.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>plot.mkinfit. mkin 0.9.42</title>
+<title>plot.mkinfit. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/plot.mmkin.html b/inst/web/plot.mmkin.html
index 587bf894..def3a11d 100644
--- a/inst/web/plot.mmkin.html
+++ b/inst/web/plot.mmkin.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>plot.mmkin. mkin 0.9.42</title>
+<title>plot.mmkin. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/print.mkinds.html b/inst/web/print.mkinds.html
index 285684fd..6ff9e02a 100644
--- a/inst/web/print.mkinds.html
+++ b/inst/web/print.mkinds.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>print.mkinds. mkin 0.9.42</title>
+<title>print.mkinds. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/print.mkinmod.html b/inst/web/print.mkinmod.html
index d773050d..16c59669 100644
--- a/inst/web/print.mkinmod.html
+++ b/inst/web/print.mkinmod.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>print.mkinmod. mkin 0.9.42</title>
+<title>print.mkinmod. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/schaefer07_complex_case.html b/inst/web/schaefer07_complex_case.html
index c6b9e980..f2975fe6 100644
--- a/inst/web/schaefer07_complex_case.html
+++ b/inst/web/schaefer07_complex_case.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>schaefer07_complex_case. mkin 0.9.42</title>
+<title>schaefer07_complex_case. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/summary.mkinfit.html b/inst/web/summary.mkinfit.html
index 40e3ca63..4ef29e42 100644
--- a/inst/web/summary.mkinfit.html
+++ b/inst/web/summary.mkinfit.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>summary.mkinfit. mkin 0.9.42</title>
+<title>summary.mkinfit. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
@@ -157,17 +157,17 @@
<h2 id="examples">Examples</h2>
<pre class="examples"><div class='input'> summary(mkinfit(mkinmod(parent = list(type = &quot;SFO&quot;)), FOCUS_2006_A, quiet = TRUE))
</div>
-<div class='output'>mkin version: 0.9.42
+<div class='output'>mkin version: 0.9.43
R version: 3.2.4
-Date of fit: Wed Mar 23 18:10:56 2016
-Date of summary: Wed Mar 23 18:10:56 2016
+Date of fit: Thu Mar 24 08:26:38 2016
+Date of summary: Thu Mar 24 08:26:38 2016
Equations:
d_parent = - k_parent_sink * parent
Model predictions using solution type analytical
-Fitted with method Port using 35 model solutions performed in 0.109 s
+Fitted with method Port using 35 model solutions performed in 0.099 s
Weighting: none
diff --git a/inst/web/synthetic_data_for_UBA.html b/inst/web/synthetic_data_for_UBA.html
index 9fb9d23e..56a646c1 100644
--- a/inst/web/synthetic_data_for_UBA.html
+++ b/inst/web/synthetic_data_for_UBA.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>synthetic_data_for_UBA_2014. mkin 0.9.42</title>
+<title>synthetic_data_for_UBA_2014. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="">
@@ -32,7 +32,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
diff --git a/inst/web/transform_odeparms.html b/inst/web/transform_odeparms.html
index 34428004..5e16551f 100644
--- a/inst/web/transform_odeparms.html
+++ b/inst/web/transform_odeparms.html
@@ -2,7 +2,7 @@
<html lang="en">
<head>
<meta charset="utf-8">
-<title>transform_odeparms. mkin 0.9.42</title>
+<title>transform_odeparms. mkin 0.9.43</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="author" content="
Johannes Ranke
@@ -34,7 +34,7 @@
<div class="navbar">
<div class="navbar-inner">
<div class="container">
- <a class="brand" href="#">mkin 0.9.42</a>
+ <a class="brand" href="#">mkin 0.9.43</a>
<div class="nav">
<ul class="nav">
<li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
@@ -133,10 +133,10 @@ backtransform_odeparms(transparms, mkinmod, transform_rates&nbsp;=&nbsp;TRUE, t
fit &lt;- mkinfit(SFO_SFO, FOCUS_2006_D, quiet = TRUE)
summary(fit, data=FALSE) # See transformed and backtransformed parameters
</div>
-<div class='output'>mkin version: 0.9.42
+<div class='output'>mkin version: 0.9.43
R version: 3.2.4
-Date of fit: Wed Mar 23 18:10:57 2016
-Date of summary: Wed Mar 23 18:10:57 2016
+Date of fit: Thu Mar 24 08:26:40 2016
+Date of summary: Thu Mar 24 08:26:40 2016
Equations:
d_parent = - k_parent_sink * parent - k_parent_m1 * parent
@@ -144,7 +144,7 @@ d_m1 = + k_parent_m1 * parent - k_m1_sink * m1
Model predictions using solution type deSolve
-Fitted with method Port using 153 model solutions performed in 0.669 s
+Fitted with method Port using 153 model solutions performed in 0.662 s
Weighting: none

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