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authorJohannes Ranke <jranke@uni-bremen.de>2021-06-17 13:58:34 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2021-06-17 13:58:34 +0200
commit05baf3bf92cba127fd2319b779db78be86170e5e (patch)
tree98b0c8c63badd2421afa5ebaf12530290ac9c571 /man/nlmixr.mmkin.Rd
parent28197d5fcbaf85b39f4c032b8180d68b6f6a01b3 (diff)
Let backtransform_odeparms handle nlmixr formation fractions
Also adapt summary.nlmixr.mmkin to correctly handle the way formation fractions are translated to nlmixr
Diffstat (limited to 'man/nlmixr.mmkin.Rd')
-rw-r--r--man/nlmixr.mmkin.Rd15
1 files changed, 11 insertions, 4 deletions
diff --git a/man/nlmixr.mmkin.Rd b/man/nlmixr.mmkin.Rd
index 4ab30272..0f4f41a2 100644
--- a/man/nlmixr.mmkin.Rd
+++ b/man/nlmixr.mmkin.Rd
@@ -16,6 +16,8 @@
error_model = object[[1]]$err_mod,
test_log_parms = TRUE,
conf.level = 0.6,
+ degparms_start = "auto",
+ eta_start = "auto",
...,
save = NULL,
envir = parent.frame()
@@ -27,7 +29,8 @@ nlmixr_model(
object,
est = c("saem", "focei"),
degparms_start = "auto",
- test_log_parms = FALSE,
+ eta_start = "auto",
+ test_log_parms = TRUE,
conf.level = 0.6,
error_model = object[[1]]$err_mod,
add_attributes = FALSE
@@ -58,6 +61,13 @@ when calculating mean degradation parameters using \link{mean_degparms}.}
\item{conf.level}{Possibility to adjust the required confidence level
for parameter that are tested if requested by 'test_log_parms'.}
+\item{degparms_start}{Parameter values given as a named numeric vector will
+be used to override the starting values obtained from the 'mmkin' object.}
+
+\item{eta_start}{Standard deviations on the transformed scale given as a
+named numeric vector will be used to override the starting values obtained
+from the 'mmkin' object.}
+
\item{\dots}{Passed to \link{nlmixr_model}}
\item{save}{Passed to \link[nlmixr:nlmixr]{nlmixr::nlmixr}}
@@ -68,9 +78,6 @@ for parameter that are tested if requested by 'test_log_parms'.}
\item{digits}{Number of digits to use for printing}
-\item{degparms_start}{Parameter values given as a named numeric vector will
-be used to override the starting values obtained from the 'mmkin' object.}
-
\item{add_attributes}{Should the starting values used for degradation model
parameters and their distribution and for the error model parameters
be returned as attributes?}

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