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| author | jranke <jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb> | 2010-05-18 12:58:38 +0000 |
|---|---|---|
| committer | jranke <jranke@edb9625f-4e0d-4859-8d74-9fd3b1da38cb> | 2010-05-18 12:58:38 +0000 |
| commit | 16f5b1d3c0136413e92b2be0f20d365e92e9cd1c (patch) | |
| tree | edab7b27ba4253b9dd45520e504c54851f65f26f /man/summary.mkinfit.Rd | |
| parent | 30cbb4092f6d2d3beff5800603374a0d009ad770 (diff) | |
Much more complete version that was just submitted to CRAN.
git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@9 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Diffstat (limited to 'man/summary.mkinfit.Rd')
| -rw-r--r-- | man/summary.mkinfit.Rd | 65 |
1 files changed, 65 insertions, 0 deletions
diff --git a/man/summary.mkinfit.Rd b/man/summary.mkinfit.Rd new file mode 100644 index 00000000..1c305899 --- /dev/null +++ b/man/summary.mkinfit.Rd @@ -0,0 +1,65 @@ +\name{summary.mkinfit}
+\alias{summary.mkinfit}
+\alias{print.summary.mkinfit}
+\title{
+ Summary method for class "mkinfit".
+}
+\description{
+ Lists model equations, the summary as returned by \code{\link{summary.modFit}},
+ the chi2 error levels calculated according to FOCUS guidance (2006) as far
+ as defined therein, and optionally the data, consisting of observed, predicted
+ and residual values.
+}
+\usage{
+\method{summary}{mkinfit}(object, data = TRUE, distimes = TRUE, cov = FALSE, ...)
+\method{print}{summary.mkinfit}(x, digits = max(3, getOption("digits") - 3), ...)
+}
+
+\arguments{
+ \item{object}{
+ an object of class \code{\link{mkinfit}}.
+}
+ \item{x}{
+ an object of class \code{summary.mkinfit}.
+}
+ \item{data}{
+ logical, indicating whether the data should be included in the summary.
+}
+ \item{distimes}{
+ logical, indicating whether DT50 and DT90 values shoule be included.
+}
+ \item{cov}{
+ logical, indicating whether parameter covariances should be calculated.
+Passed to \code{\link{summary.modFit}}. }
+ \item{digits}{
+ Number of digits to use for printing
+}
+ \item{\dots}{
+ optional arguments passed to methods like \code{print}.
+}
+}
+\value{
+ The summary function returns a list with the same components as
+ \code{\link{summary.modFit}}, and the additional components
+ \item{diffs }{The differential equations used in the model}
+ \item{data }{The data (see Description above).}
+ \item{start }{The starting values and bounds, if applicable, for optimised parameters.}
+ \item{fixed }{The values of fixed parameters.}
+ \item{errmin }{The chi2 error levels for each observed variable.}
+ \item{disstimes }{The DT50 and DT90 values for each observed variable.}
+ The print method is called for its side effect, i.e. printing the summary.
+}
+\references{
+ FOCUS (2006) \dQuote{Guidance Document on Estimating Persistence and
+ Degradation Kinetics from Environmental Fate Studies on Pesticides in EU
+ Registration} Report of the FOCUS Work Group on Degradation Kinetics,
+ EC Document Reference Sanco/10058/2005 version 2.0, 434 pp,
+ \url{http://focus.jrc.ec.europa.eu/dk}
+}
+\author{
+ Johannes Ranke <jranke@harlan.com>
+}
+\examples{
+ summary(mkinfit(mkinmod(parent = list(type = "SFO")), FOCUS_2006_A))
+}
+\keyword{ utilities }
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