Improve parhist and llhist

In particular, adapt the display of parameter boxplots
for saem fits using mkin transformations to the way
used for saem fits using saemix transformations, i.e.
always show parameters on the natural scale, and normalised them by
dividing by the median from the multiple runs.

1 files changed, 3 insertions, 7 deletions

diff --git a/man/parhist.Rd b/man/parhist.Rd
index 1f517298..a8319283 100644
--- a/man/parhist.Rd
+++ b/man/parhist.Rd
@@ -4,7 +4,7 @@
 \alias{parhist}
 \title{Plot parameter distributions from multistart objects}
 \usage{
-parhist(object, lpos = "topleft", main = "", ...)
+parhist(object, lpos = "bottomleft", main = "", ...)
 }
 \arguments{
 \item{object}{The \link{multistart} object}
@@ -16,12 +16,8 @@ parhist(object, lpos = "topleft", main = "", ...)
 \item{\dots}{Passed to \link{boxplot}}
 }
 \description{
-Produces a boxplot with all parameters from the multiple runs, scaled using
-their medians. If parameter transformations were done by mkin (default in
-\link{saem}), then the parameters found by saem are on the transformed scale, and
-scaling is simply done by subtracting the median. If parameter
-transformations were done by saemix, scaling is done by dividing by the
-median, as in the paper by Duchesne et al. (2021).
+Produces a boxplot with all parameters from the multiple runs, divided by
+using their medians as in the paper by Duchesne et al. (2021).
 }
 \references{
 Duchesne R, Guillemin A, Gandrillon O, Crauste F. Practical