aboutsummaryrefslogtreecommitdiff
path: root/man
diff options
context:
space:
mode:
authorJohannes Ranke <jranke@uni-bremen.de>2021-01-06 20:34:52 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2021-01-06 20:38:29 +0100
commitf99bdd8697c3bfbd432a320774a4692fd0e1241a (patch)
treef2f03f30d3fa3f25780f21611ec407b7a90ad2eb /man
parentd28ce9f8ad6f9573e403ebd8eb637ecd5e5b0e02 (diff)
Make saemix and corresponding tests optional
Address release critical check and test issues
Diffstat (limited to 'man')
-rw-r--r--man/D24_2014.Rd2
-rw-r--r--man/saem.Rd8
-rw-r--r--man/summary.saem.mmkin.Rd2
3 files changed, 7 insertions, 5 deletions
diff --git a/man/D24_2014.Rd b/man/D24_2014.Rd
index 8d0e632c..1afa9596 100644
--- a/man/D24_2014.Rd
+++ b/man/D24_2014.Rd
@@ -36,6 +36,7 @@ specific pieces of information in the comments.
}
\examples{
print(D24_2014)
+\dontrun{
print(D24_2014$ds[[1]], data = TRUE)
m_D24 = mkinmod(D24 = mkinsub("SFO", to = "DCP"),
DCP = mkinsub("SFO", to = "DCA"),
@@ -46,4 +47,5 @@ m_D24_2 = mkinmod(D24 = mkinsub("DFOP", to = "DCP"),
DCA = mkinsub("SFO"))
print(m_D24_2)
}
+}
\keyword{datasets}
diff --git a/man/saem.Rd b/man/saem.Rd
index 775a8e7b..969e9a22 100644
--- a/man/saem.Rd
+++ b/man/saem.Rd
@@ -57,7 +57,7 @@ automatic choice is not desired}
\item{control}{Passed to \link[saemix:saemix]{saemix::saemix}}
\item{verbose}{Should we print information about created objects of
-type \link[saemix:SaemixModel-class]{saemix::SaemixModel} and \link[saemix:SaemixData-class]{saemix::SaemixData}?}
+type \link[saemix:SaemixModel]{saemix::SaemixModel} and \link[saemix:SaemixData]{saemix::SaemixData}?}
\item{suppressPlot}{Should we suppress any plotting that is done
by the saemix function?}
@@ -71,12 +71,12 @@ and the end of the optimisation process?}
}
\value{
An S3 object of class 'saem.mmkin', containing the fitted
-\link[saemix:SaemixObject-class]{saemix::SaemixObject} as a list component named 'so'. The
+\link[saemix:SaemixObject]{saemix::SaemixObject} as a list component named 'so'. The
object also inherits from 'mixed.mmkin'.
-An \link[saemix:SaemixModel-class]{saemix::SaemixModel} object.
+An \link[saemix:SaemixModel]{saemix::SaemixModel} object.
-An \link[saemix:SaemixData-class]{saemix::SaemixData} object.
+An \link[saemix:SaemixData]{saemix::SaemixData} object.
}
\description{
This function uses \code{\link[saemix:saemix]{saemix::saemix()}} as a backend for fitting nonlinear mixed
diff --git a/man/summary.saem.mmkin.Rd b/man/summary.saem.mmkin.Rd
index 67cb3cbb..4f83489c 100644
--- a/man/summary.saem.mmkin.Rd
+++ b/man/summary.saem.mmkin.Rd
@@ -27,7 +27,7 @@ included.}
\item{digits}{Number of digits to use for printing}
}
\value{
-The summary function returns a list based on the \link[saemix:SaemixObject-class]{saemix::SaemixObject}
+The summary function returns a list based on the \link[saemix:SaemixObject]{saemix::SaemixObject}
obtained in the fit, with at least the following additional components
\item{saemixversion, mkinversion, Rversion}{The saemix, mkin and R versions used}
\item{date.fit, date.summary}{The dates where the fit and the summary were

Contact - Imprint