Compiled models article, reduce distractions

- Added a section with platform specific notes on getting compiled
models to work to the compiled models article
- Don't return empty SFORB parameter list from endpoints() if there is no
SFORB model
- Avoid warnings when using standardized = TRUE in plot.mmkin()

1 files changed, 15 insertions, 15 deletions

diff --git a/test.log b/test.log
index 77130814..84b13a10 100644
--- a/test.log
+++ b/test.log
@@ -2,35 +2,35 @@ Loading mkin
 Testing mkin
 ✔ |  OK F W S | Context
 ✔ |   2       | Export dataset for reading into CAKE
-✔ |  13       | Results for FOCUS D established in expertise for UBA (Ranke 2014) [3.7 s]
-✔ |   4       | Calculation of FOCUS chi2 error levels [2.3 s]
-✔ |   4       | Fitting the SFORB model [1.8 s]
+✔ |  13       | Results for FOCUS D established in expertise for UBA (Ranke 2014) [3.5 s]
+✔ |   4       | Calculation of FOCUS chi2 error levels [2.2 s]
+✔ |   4       | Fitting the SFORB model [1.7 s]
 ✔ |   5       | Calculation of Akaike weights
-✔ |  10       | Confidence intervals and p-values [10.7 s]
-✔ |  14       | Error model fitting [42.8 s]
-✔ |   6       | Test fitting the decline of metabolites from their maximum [0.8 s]
-✔ |   1       | Fitting the logistic model [1.0 s]
+✔ |  10       | Confidence intervals and p-values [9.6 s]
+✔ |  14       | Error model fitting [38.4 s]
+✔ |   6       | Test fitting the decline of metabolites from their maximum [0.7 s]
+✔ |   1       | Fitting the logistic model [0.9 s]
 ✔ |   1       | Test dataset class mkinds used in gmkin
-✔ |  12       | Special cases of mkinfit calls [2.5 s]
+✔ |  12       | Special cases of mkinfit calls [2.2 s]
 ✔ |   9       | mkinmod model generation and printing [0.2 s]
-✔ |   3       | Model predictions with mkinpredict [0.4 s]
-✔ |  16       | Evaluations according to 2015 NAFTA guidance [4.4 s]
-✔ |   4       | Calculation of maximum time weighted average concentrations (TWAs) [2.3 s]
+✔ |   3       | Model predictions with mkinpredict [0.3 s]
+✔ |  16       | Evaluations according to 2015 NAFTA guidance [4.2 s]
+✔ |   4       | Calculation of maximum time weighted average concentrations (TWAs) [2.2 s]
 ✔ |   3       | Summary
 ✔ |  11       | Plotting [0.6 s]
 ✔ |   4       | AIC calculation
 ✔ |   2       | Residuals extracted from mkinfit models
-✔ |   2       | Complex test case from Schaefer et al. (2007) Piacenza paper [5.7 s]
+✔ |   2       | Complex test case from Schaefer et al. (2007) Piacenza paper [5.3 s]
 ✔ |   1       | Summaries of old mkinfit objects
-✔ |   4       | Results for synthetic data established in expertise for UBA (Ranke 2014) [7.7 s]
-✔ |   7     1 | Hypothesis tests [35.7 s]
+✔ |   4       | Results for synthetic data established in expertise for UBA (Ranke 2014) [7.1 s]
+✔ |   7     1 | Hypothesis tests [32.5 s]
 ────────────────────────────────────────────────────────────────────────────────
 test_tests.R:60: skip: We can do a likelihood ratio test using an update specification
 Reason: This errors out if called by testthat while it works in a normal R session
 ────────────────────────────────────────────────────────────────────────────────
 
 ══ Results ═════════════════════════════════════════════════════════════════════
-Duration: 123.0 s
+Duration: 112.1 s
 
 OK:       138
 Failed:   0