Bug fix in plot.mkinfit

In residual plots, use xlab and xlim if appropriate

1 files changed, 25 insertions, 8 deletions

diff --git a/test.log b/test.log
index 80b64269..b49088e5 100644
--- a/test.log
+++ b/test.log
@@ -3,14 +3,14 @@ Loading required package: parallel
 Testing mkin
 ✔ |  OK F W S | Context
 ✔ |   5       | AIC calculation
-✔ |   2       | Export dataset for reading into CAKE [0.2 s]
+✔ |   2       | Export dataset for reading into CAKE
 ✔ |  14       | Results for FOCUS D established in expertise for UBA (Ranke 2014) [1.0 s]
 ✔ |   4       | Calculation of FOCUS chi2 error levels [0.5 s]
-✔ |   7       | Fitting the SFORB model [3.4 s]
+✔ |   7       | Fitting the SFORB model [3.5 s]
 ✔ |   5       | Analytical solutions for coupled models [3.1 s]
 ✔ |   5       | Calculation of Akaike weights
-✔ |  12       | Confidence intervals and p-values [1.1 s]
-✔ |  14       | Error model fitting [4.1 s]
+✔ |  12       | Confidence intervals and p-values [1.0 s]
+✔ |  14       | Error model fitting [4.2 s]
 ✔ |   5       | Time step normalisation
 ✔ |   4       | Test fitting the decline of metabolites from their maximum [0.3 s]
 ✔ |   1       | Fitting the logistic model [0.2 s]
@@ -19,10 +19,27 @@ Testing mkin
 ✔ |   1       | mkinfit features [0.3 s]
 ✔ |  10       | Special cases of mkinfit calls [0.3 s]
 ✔ |   8       | mkinmod model generation and printing [0.2 s]
-✔ |   3       | Model predictions with mkinpredict [0.3 s]
+✔ |   3       | Model predictions with mkinpredict [0.4 s]
 ✔ |  16       | Evaluations according to 2015 NAFTA guidance [1.6 s]
 ✔ |   9       | Nonlinear mixed-effects models [7.9 s]
-✔ |  14       | Plotting [1.7 s]
+✖ |  10 4     | Plotting [1.7 s]
+────────────────────────────────────────────────────────────────────────────────
+Failure (test_plot.R:20:3): Plotting mkinfit, mmkin and mixed model objects is reproducible
+Figures don't match: mkinfit-plot-for-focus-c-with-residuals-like-in-gmkin.svg
+
+
+Failure (test_plot.R:21:3): Plotting mkinfit, mmkin and mixed model objects is reproducible
+Figures don't match: plot-res-for-focus-c.svg
+
+
+Failure (test_plot.R:22:3): Plotting mkinfit, mmkin and mixed model objects is reproducible
+Figures don't match: mkinfit-plot-for-focus-c-with-sep-true.svg
+
+
+Failure (test_plot.R:30:3): Plotting mkinfit, mmkin and mixed model objects is reproducible
+Figures don't match: plot-res-for-focus-d.svg
+
+────────────────────────────────────────────────────────────────────────────────
 ✔ |   4       | Residuals extracted from mkinfit models
 ✔ |   2       | Complex test case from Schaefer et al. (2007) Piacenza paper [1.5 s]
 ✔ |   4       | Summary [0.1 s]
@@ -32,6 +49,6 @@ Testing mkin
 ✔ |   4       | Calculation of maximum time weighted average concentrations (TWAs) [2.5 s]
 
 ══ Results ═════════════════════════════════════════════════════════════════════
-Duration: 40.9 s
+Duration: 41.0 s
 
-[ FAIL 0 | WARN 0 | SKIP 0 | PASS 174 ]
+[ FAIL 4 | WARN 0 | SKIP 0 | PASS 170 ]