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authorJohannes Ranke <jranke@uni-bremen.de>2020-05-09 21:18:42 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2020-05-09 21:18:42 +0200
commitefab37957381919c21d874906ce870f4941c760a (patch)
treed485fa148ec1513a0c0810780a1ed10c4f9097d2 /test.log
parent47ef00e3d0a961f8fbecf0bd5da0283bed21bb96 (diff)
Avoid the call to merge for analytical solutions
This increases performance up to a factor of five!
Diffstat (limited to 'test.log')
-rw-r--r--test.log33
1 files changed, 17 insertions, 16 deletions
diff --git a/test.log b/test.log
index 489550a2..7788f109 100644
--- a/test.log
+++ b/test.log
@@ -2,34 +2,35 @@ Loading mkin
Testing mkin
✔ | OK F W S | Context
✔ | 2 | Export dataset for reading into CAKE
-✔ | 13 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [3.1 s]
-✔ | 4 | Calculation of FOCUS chi2 error levels [1.9 s]
-✔ | 7 | Fitting the SFORB model [9.6 s]
+✔ | 13 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [3.3 s]
+✔ | 4 | Calculation of FOCUS chi2 error levels [2.0 s]
+✔ | 7 | Fitting the SFORB model [9.1 s]
+✔ | 1 | Analytical solutions for coupled models [1.1 s]
✔ | 5 | Calculation of Akaike weights
-✔ | 10 | Confidence intervals and p-values [8.3 s]
-✔ | 14 | Error model fitting [22.1 s]
-✔ | 6 | Test fitting the decline of metabolites from their maximum [0.7 s]
-✔ | 1 | Fitting the logistic model [0.7 s]
+✔ | 10 | Confidence intervals and p-values [1.0 s]
+✔ | 14 | Error model fitting [3.7 s]
+✔ | 6 | Test fitting the decline of metabolites from their maximum [0.2 s]
+✔ | 1 | Fitting the logistic model [0.2 s]
✔ | 1 | Test dataset class mkinds used in gmkin
-✔ | 12 | Special cases of mkinfit calls [2.1 s]
+✔ | 12 | Special cases of mkinfit calls [0.6 s]
✔ | 8 | mkinmod model generation and printing [0.2 s]
✔ | 3 | Model predictions with mkinpredict [0.4 s]
-✔ | 16 | Evaluations according to 2015 NAFTA guidance [3.8 s]
-✔ | 9 | Nonlinear mixed-effects models [11.9 s]
+✔ | 16 | Evaluations according to 2015 NAFTA guidance [1.4 s]
+✔ | 9 | Nonlinear mixed-effects models [12.1 s]
✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.4 s]
✔ | 3 | Summary
-✔ | 14 | Plotting [4.0 s]
+✔ | 14 | Plotting [3.5 s]
✔ | 4 | AIC calculation
✔ | 4 | Residuals extracted from mkinfit models
-✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [3.8 s]
+✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [4.2 s]
✔ | 1 | Summaries of old mkinfit objects
-✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [6.0 s]
-✔ | 9 | Hypothesis tests [21.3 s]
+✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [6.4 s]
+✔ | 9 | Hypothesis tests [17.8 s]
══ Results ═════════════════════════════════════════════════════════════════════
-Duration: 102.5 s
+Duration: 69.9 s
-OK: 156
+OK: 157
Failed: 0
Warnings: 0
Skipped: 0

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