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authorJohannes Ranke <jranke@uni-bremen.de>2022-03-02 18:03:54 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2022-03-02 18:03:54 +0100
commit2bb59c88d49b193f278916ad9cc4de83c0de9604 (patch)
treef286bba254d7c5f2d32eeb2b11f6148938b0e1e1 /tests/testthat/summary_dfop_nlme_1.txt
parent351248d07f810ccb6c497633a02cd48ee35526e6 (diff)
Make tests more platform independent, update docs
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+nlme version used for fitting: Dummy 0.0 for testing
+mkin version used for pre-fitting: Dummy 0.0 for testing
+R version used for fitting: Dummy R version for testing
+Date of fit: Dummy date for testing
+Date of summary: Dummy date for testing
+
+Equations:
+d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *
+ time)) / (g * exp(-k1 * time) + (1 - g) * exp(-k2 * time)))
+ * parent
+
+Data:
+270 observations of 1 variable(s) grouped in 15 datasets
+
+Model predictions using solution type analytical
+
+Fitted in test time 0 s using 3 iterations
+
+Variance model: Constant variance
+
+Mean of starting values for individual parameters:
+parent_0 log_k1 log_k2 g_qlogis
+ 100.06 -2.68 -4.16 0.01
+
+Fixed degradation parameter values:
+None
+
+Results:
+
+ AIC BIC logLik
+ 1242 1274 -612
+
+Optimised, transformed parameters with symmetric confidence intervals:
+ lower est. upper
+parent_0 99.6 100.1 100.6
+log_k1 -2.9 -2.7 -2.4
+log_k2 -4.2 -4.1 -4.0
+g_qlogis -0.7 -0.5 -0.2
+
+Correlation:
+ pr_0 lg_1 lg_2
+log_k1 0.2
+log_k2 0.1 0.2
+g_qlogis -0.2 -0.5 -0.4
+
+Random effects:
+ Formula: list(parent_0 ~ 1, log_k1 ~ 1, log_k2 ~ 1, g_qlogis ~ 1)
+ Level: ds
+ Structure: Diagonal
+ parent_0 log_k1 log_k2 g_qlogis Residual
+StdDev: 0.4 0.3 0.2 0.2 2
+
+
+Backtransformed parameters with asymmetric confidence intervals:
+ lower est. upper
+parent_0 1e+02 1e+02 1e+02
+k1 6e-02 7e-02 9e-02
+k2 1e-02 2e-02 2e-02
+g 3e-01 4e-01 5e-01
+
+Estimated disappearance times:
+ DT50 DT90 DT50back DT50_k1 DT50_k2
+parent 23 111 33 10 42

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