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authorJohannes Ranke <jranke@uni-bremen.de>2020-12-08 22:08:38 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2020-12-08 22:08:38 +0100
commitf606838c5310f365eea1c0d6421f5c3636a4dc79 (patch)
treebdf4fdb5cb3a94cc46176f9e69132af11e81f749 /tests/testthat/test_plot.R
parent2663158c85fca9c088d1f8cfa3bc05ad1ac36f94 (diff)
mixed.mmkin and test coverage
Diffstat (limited to 'tests/testthat/test_plot.R')
-rw-r--r--tests/testthat/test_plot.R10
1 files changed, 9 insertions, 1 deletions
diff --git a/tests/testthat/test_plot.R b/tests/testthat/test_plot.R
index 587ec02e..72f1020c 100644
--- a/tests/testthat/test_plot.R
+++ b/tests/testthat/test_plot.R
@@ -2,7 +2,6 @@ context("Plotting")
test_that("Plotting mkinfit and mmkin objects is reproducible", {
skip_on_cran()
- skip_on_travis()
plot_default_FOCUS_C_SFO <- function() plot(fits[["SFO", "FOCUS_C"]])
plot_res_FOCUS_C_SFO <- function() plot(fits[["SFO", "FOCUS_C"]], show_residuals = TRUE)
plot_res_FOCUS_C_SFO_2 <- function() plot_res(fits[["SFO", "FOCUS_C"]])
@@ -17,6 +16,11 @@ test_that("Plotting mkinfit and mmkin objects is reproducible", {
plot_errmod_fit_D_obs_eigen <- function() plot_err(fit_D_obs_eigen, sep_obs = FALSE)
plot_errmod_fit_C_tc <- function() plot_err(fit_C_tc)
+ plot_biphasic_mmkin <- function() plot(mixed(mmkin_biphasic))
+ plot_biphasic_nlme <- function() plot(nlme_biphasic)
+ plot_biphasic_saem_s <- function() plot(saem_biphasic_s)
+ plot_biphasic_saem_m <- function() plot(saem_biphasic_m)
+
plot_res_sfo_sfo <- function() plot_res(f_sfo_sfo_desolve)
plot_err_sfo_sfo <- function() plot_err(f_sfo_sfo_desolve)
plot_errmod_fit_obs_1 <- function() plot_err(fit_obs_1, sep_obs = FALSE)
@@ -32,6 +36,10 @@ test_that("Plotting mkinfit and mmkin objects is reproducible", {
vdiffr::expect_doppelganger("mmkin plot for FOCUS C", mmkin_FOCUS_C)
vdiffr::expect_doppelganger("mmkin plot for SFO (FOCUS C and D)", mmkin_SFO)
vdiffr::expect_doppelganger("plot_errmod with FOCUS C tc", plot_errmod_fit_C_tc)
+ vdiffr::expect_doppelganger("mixed model fit for mmkin object", plot_biphasic_mmkin)
+ vdiffr::expect_doppelganger("mixed model fit for nlme object", plot_biphasic_nlme)
+ vdiffr::expect_doppelganger("mixed model fit for saem object with saemix transformations", plot_biphasic_saem_s)
+ vdiffr::expect_doppelganger("mixed model fit for saem object with mkin transformations", plot_biphasic_saem_m)
skip_on_travis() # Still not working on Travis, maybe because of deSolve producing
# different results when not working with a compiled model or eigenvalues
vdiffr::expect_doppelganger("plot_errmod with FOCUS D obs eigen", plot_errmod_fit_D_obs_eigen)

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