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authorJohannes Ranke <jranke@uni-bremen.de>2022-10-26 09:36:44 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2022-10-26 09:36:44 +0200
commitd25974f643ee46b7cd5ccd8331dd7bb0b14ab27a (patch)
tree47747ea2adfefd0099bd74fc4385412add6ed795 /tests
parent3c5b2596daef4ed0ee5c38a7141fdf48dbe7c070 (diff)
Don't test parhist and llhist on travis, docs
Diffstat (limited to 'tests')
-rw-r--r--tests/testthat/test_multistart.R24
1 files changed, 17 insertions, 7 deletions
diff --git a/tests/testthat/test_multistart.R b/tests/testthat/test_multistart.R
index e5b44e78..e4885191 100644
--- a/tests/testthat/test_multistart.R
+++ b/tests/testthat/test_multistart.R
@@ -4,20 +4,30 @@ test_that("multistart works for saem.mmkin models", {
set.seed(123456)
saem_sfo_s_multi <- multistart(sfo_saem_1_reduced, n = 8, cores = n_cores,
no_random_effect = "parent_0")
+ anova_sfo <- anova(sfo_saem_1,
+ sfo_saem_1_reduced,
+ best(saem_sfo_s_multi),
+ test = TRUE
+ )
+ expect_true(anova_sfo[3, "Pr(>Chisq)"] > 0.5)
- llhist_sfo <- function() llhist(saem_sfo_s_multi)
- parhist_sfo <- function() parhist(saem_sfo_s_multi, ylim = c(0.5, 2))
- vdiffr::expect_doppelganger("llhist for sfo fit", llhist_sfo)
- vdiffr::expect_doppelganger("parhist for sfo fit", parhist_sfo)
-
+ skip_on_cran() # Save CRAN time
set.seed(123456)
saem_biphasic_m_multi <- multistart(saem_biphasic_m, n = 8,
cores = n_cores)
expect_known_output(print(saem_biphasic_m_multi),
file = "print_multistart_biphasic.txt")
- skip_on_cran()
- skip_on_travis()
+ anova_biphasic <- anova(saem_biphasic_m,
+ best(saem_biphasic_m_multi))
+
+ expect_true(anova_biphasic[2, "AIC"] < anova_biphasic[1, "AIC"])
+ skip_on_travis() # Plots are platform dependent
+
+ llhist_sfo <- function() llhist(saem_sfo_s_multi)
+ parhist_sfo <- function() parhist(saem_sfo_s_multi, ylim = c(0.5, 2))
+ vdiffr::expect_doppelganger("llhist for sfo fit", llhist_sfo)
+ vdiffr::expect_doppelganger("parhist for sfo fit", parhist_sfo)
llhist_biphasic <- function() llhist(saem_biphasic_m_multi)
parhist_biphasic <- function() parhist(saem_biphasic_m_multi,

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