- Fitting and summaries now work with the new parameter transformations.

- The SFORB models with metabolites is broken (see TODO)
- Moved the vignette to the location recommended since R 2.14
- Added the missing documentation
- Commented out the schaefer_complex_case test, as this version of
  mkin is not able to fit a model without sink and therefore 
  mkin estimated parameters are quite different




git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@22 edb9625f-4e0d-4859-8d74-9fd3b1da38cb

1 files changed, 31 insertions, 0 deletions

diff --git a/vignettes/header.tex b/vignettes/header.tex
new file mode 100644
index 00000000..707997c4
--- /dev/null
+++ b/vignettes/header.tex
@@ -0,0 +1,31 @@
+\usepackage{booktabs}

+\usepackage{amsfonts}

+\usepackage{latexsym}

+\usepackage{amsmath}

+\usepackage{amssymb}

+\usepackage{graphicx}

+\usepackage{parskip}

+\usepackage[round]{natbib}

+\usepackage{amstext}

+\usepackage{hyperref}

+\usepackage[utf8]{inputenc}

+

+\newcommand{\Rpackage}[1]{{\normalfont\fontseries{b}\selectfont #1}}

+\newcommand{\Robject}[1]{\texttt{#1}}

+\newcommand{\Rclass}[1]{\textit{#1}}

+\newcommand{\Rcmd}[1]{\texttt{#1}}

+

+\newcommand{\RR}{\textsf{R}}

+

+\RequirePackage[T1]{fontenc}

+\RequirePackage{graphicx,ae,fancyvrb}

+\IfFileExists{upquote.sty}{\RequirePackage{upquote}}{}

+\usepackage{relsize}

+

+\DefineVerbatimEnvironment{Sinput}{Verbatim}{baselinestretch=1.05}

+\DefineVerbatimEnvironment{Soutput}{Verbatim}{fontfamily=courier,

+                                              baselinestretch=1.05,

+                                              fontshape=it,

+                                              fontsize=\relsize{-1}}

+\DefineVerbatimEnvironment{Scode}{Verbatim}{}  

+\newenvironment{Schunk}{}{}