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authorJohannes Ranke <jranke@uni-bremen.de>2021-02-15 17:36:12 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2021-02-15 17:36:12 +0100
commitb9be19af5e3085216d0cd5af439332f631fa8b92 (patch)
treee10511f60e7f1713b781d5ea2acf885f3d1e6767 /vignettes
parent11c7f26dd6c532d977d9875f3c16952c7bba37ca (diff)
Fully rebuild docs, rerun tests and check
Diffstat (limited to 'vignettes')
-rw-r--r--vignettes/FOCUS_D.html4
-rw-r--r--vignettes/FOCUS_L.html32
-rw-r--r--vignettes/web_only/mkin_benchmarks.rdabin1081 -> 1137 bytes
3 files changed, 18 insertions, 18 deletions
diff --git a/vignettes/FOCUS_D.html b/vignettes/FOCUS_D.html
index f1f078db..a158629a 100644
--- a/vignettes/FOCUS_D.html
+++ b/vignettes/FOCUS_D.html
@@ -463,8 +463,8 @@ print(FOCUS_2006_D)</code></pre>
<pre class="r"><code>summary(fit)</code></pre>
<pre><code>## mkin version used for fitting: 1.0.3
## R version used for fitting: 4.0.3
-## Date of fit: Mon Feb 15 14:11:17 2021
-## Date of summary: Mon Feb 15 14:11:17 2021
+## Date of fit: Mon Feb 15 17:29:02 2021
+## Date of summary: Mon Feb 15 17:29:03 2021
##
## Equations:
## d_parent/dt = - k_parent * parent
diff --git a/vignettes/FOCUS_L.html b/vignettes/FOCUS_L.html
index 0ed46483..3d8e02c2 100644
--- a/vignettes/FOCUS_L.html
+++ b/vignettes/FOCUS_L.html
@@ -1561,8 +1561,8 @@ FOCUS_2006_L1_mkin &lt;- mkin_wide_to_long(FOCUS_2006_L1)</code></pre>
summary(m.L1.SFO)</code></pre>
<pre><code>## mkin version used for fitting: 1.0.3
## R version used for fitting: 4.0.3
-## Date of fit: Mon Feb 15 14:11:19 2021
-## Date of summary: Mon Feb 15 14:11:19 2021
+## Date of fit: Mon Feb 15 17:29:04 2021
+## Date of summary: Mon Feb 15 17:29:04 2021
##
## Equations:
## d_parent/dt = - k_parent * parent
@@ -1662,15 +1662,15 @@ summary(m.L1.SFO)</code></pre>
## doubtful</code></pre>
<pre><code>## mkin version used for fitting: 1.0.3
## R version used for fitting: 4.0.3
-## Date of fit: Mon Feb 15 14:11:19 2021
-## Date of summary: Mon Feb 15 14:11:19 2021
+## Date of fit: Mon Feb 15 17:29:04 2021
+## Date of summary: Mon Feb 15 17:29:04 2021
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
-## Fitted using 369 model solutions performed in 0.082 s
+## Fitted using 369 model solutions performed in 0.083 s
##
## Error model: Constant variance
##
@@ -1767,8 +1767,8 @@ plot(m.L2.FOMC, show_residuals = TRUE,
<pre class="r"><code>summary(m.L2.FOMC, data = FALSE)</code></pre>
<pre><code>## mkin version used for fitting: 1.0.3
## R version used for fitting: 4.0.3
-## Date of fit: Mon Feb 15 14:11:19 2021
-## Date of summary: Mon Feb 15 14:11:19 2021
+## Date of fit: Mon Feb 15 17:29:04 2021
+## Date of summary: Mon Feb 15 17:29:04 2021
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
@@ -1845,8 +1845,8 @@ plot(m.L2.DFOP, show_residuals = TRUE, show_errmin = TRUE,
<pre class="r"><code>summary(m.L2.DFOP, data = FALSE)</code></pre>
<pre><code>## mkin version used for fitting: 1.0.3
## R version used for fitting: 4.0.3
-## Date of fit: Mon Feb 15 14:11:20 2021
-## Date of summary: Mon Feb 15 14:11:20 2021
+## Date of fit: Mon Feb 15 17:29:05 2021
+## Date of summary: Mon Feb 15 17:29:05 2021
##
## Equations:
## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *
@@ -1945,8 +1945,8 @@ plot(mm.L3)</code></pre>
<pre class="r"><code>summary(mm.L3[[&quot;DFOP&quot;, 1]])</code></pre>
<pre><code>## mkin version used for fitting: 1.0.3
## R version used for fitting: 4.0.3
-## Date of fit: Mon Feb 15 14:11:20 2021
-## Date of summary: Mon Feb 15 14:11:20 2021
+## Date of fit: Mon Feb 15 17:29:05 2021
+## Date of summary: Mon Feb 15 17:29:05 2021
##
## Equations:
## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *
@@ -2053,8 +2053,8 @@ plot(mm.L4)</code></pre>
<pre class="r"><code>summary(mm.L4[[&quot;SFO&quot;, 1]], data = FALSE)</code></pre>
<pre><code>## mkin version used for fitting: 1.0.3
## R version used for fitting: 4.0.3
-## Date of fit: Mon Feb 15 14:11:20 2021
-## Date of summary: Mon Feb 15 14:11:20 2021
+## Date of fit: Mon Feb 15 17:29:05 2021
+## Date of summary: Mon Feb 15 17:29:05 2021
##
## Equations:
## d_parent/dt = - k_parent * parent
@@ -2117,15 +2117,15 @@ plot(mm.L4)</code></pre>
<pre class="r"><code>summary(mm.L4[[&quot;FOMC&quot;, 1]], data = FALSE)</code></pre>
<pre><code>## mkin version used for fitting: 1.0.3
## R version used for fitting: 4.0.3
-## Date of fit: Mon Feb 15 14:11:20 2021
-## Date of summary: Mon Feb 15 14:11:20 2021
+## Date of fit: Mon Feb 15 17:29:05 2021
+## Date of summary: Mon Feb 15 17:29:05 2021
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
-## Fitted using 224 model solutions performed in 0.046 s
+## Fitted using 224 model solutions performed in 0.047 s
##
## Error model: Constant variance
##
diff --git a/vignettes/web_only/mkin_benchmarks.rda b/vignettes/web_only/mkin_benchmarks.rda
index d2b82805..8c3369a2 100644
--- a/vignettes/web_only/mkin_benchmarks.rda
+++ b/vignettes/web_only/mkin_benchmarks.rda
Binary files differ

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