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Our kinetic models are nonlinear, so we can use various nonlinear +mixed-effects model fitting functions.</p> + </div> + + <div id="ref-usage"> + <div class="sourceCode"><pre><code>mhmkin(objects, backend = "saemix", algorithm = "saem", ...) + +# S3 method for list +mhmkin( + objects, + backend = "saemix", + ..., + cores = if (Sys.info()["sysname"] == "Windows") 1 else parallel::detectCores(), + cluster = NULL +) + +# S3 method for mhmkin +[(x, i, j, ..., drop = FALSE) + +# S3 method for mhmkin +print(x, ...)</code></pre></div> + </div> + + <div id="arguments"> + <h2>Arguments</h2> + <dl><dt>objects</dt> +<dd><p>A list of <a href="mmkin.html">mmkin</a> objects containing fits of the same +degradation models to the same data, but using different error models.</p></dd> + + +<dt>backend</dt> +<dd><p>The backend to be used for fitting. Currently, only saemix is +supported</p></dd> + + +<dt>algorithm</dt> +<dd><p>The algorithm to be used for fitting (currently not used)</p></dd> + + +<dt>...</dt> +<dd><p>Further arguments that will be passed to the nonlinear mixed-effects +model fitting function.</p></dd> + + +<dt>cores</dt> +<dd><p>The number of cores to be used for multicore processing. This +is only used when the <code>cluster</code> argument is <code>NULL</code>. On Windows +machines, cores > 1 is not supported, you need to use the <code>cluster</code> +argument to use multiple logical processors. Per default, all cores detected +by <code><a href="https://rdrr.io/r/parallel/detectCores.html" class="external-link">parallel::detectCores()</a></code> are used, except on Windows where the default +is 1.</p></dd> + + +<dt>cluster</dt> +<dd><p>A cluster as returned by makeCluster to be used for +parallel execution.</p></dd> + + +<dt>x</dt> +<dd><p>An mhmkin object.</p></dd> + + +<dt>i</dt> +<dd><p>Row index selecting the fits for specific models</p></dd> + + +<dt>j</dt> +<dd><p>Column index selecting the fits to specific datasets</p></dd> + + +<dt>drop</dt> +<dd><p>If FALSE, the method always returns an mhmkin object, otherwise +either a list of fit objects or a single fit object.</p></dd> + +</dl></div> + <div id="value"> + <h2>Value</h2> + + +<p>A two-dimensional <a href="https://rdrr.io/r/base/array.html" class="external-link">array</a> of fit objects and/or try-errors that can +be indexed using the degradation model names for the first index (row index) +and the error model names for the second index (column index), with class +attribute 'mhmkin'.</p> + + +<p>An object of class <code>mhmkin</code>.</p> + </div> + <div id="see-also"> + <h2>See also</h2> + <div class="dont-index"><p><code>[.mhmkin</code> for subsetting mhmkin objects</p></div> + </div> + <div id="author"> + <h2>Author</h2> + <p>Johannes Ranke</p> + </div> + + </div> + <div class="col-md-3 hidden-xs hidden-sm" id="pkgdown-sidebar"> + <nav id="toc" data-toggle="toc" class="sticky-top"><h2 data-toc-skip>Contents</h2> + </nav></div> +</div> + + + <footer><div class="copyright"> + <p></p><p>Developed by Johannes Ranke.</p> +</div> + +<div class="pkgdown"> + <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.6.</p> +</div> + + </footer></div> + + + + + + + </body></html> + |