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+their medians. If parameter transformations were done by mkin (default in
+saem), then the parameters found by saem are on the transformed scale, and
+scaling is simply done by subtracting the median. If parameter
+transformations were done by saemix, scaling is done by dividing by the
+median, as in the paper by Duchesne et al. (2021)."><meta name="robots" content="noindex"><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script><!--[if lt IE 9]>
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+ <div class="col-md-9 contents">
+ <div class="page-header">
+ <h1>Plot parameter distributions from multistart objects</h1>
+ <small class="dont-index">Source: <a href="https://github.com/jranke/mkin/blob/HEAD/R/parhist.R" class="external-link"><code>R/parhist.R</code></a></small>
+ <div class="hidden name"><code>parhist.Rd</code></div>
+ </div>
+
+ <div class="ref-description">
+ <p>Produces a boxplot with all parameters from the multiple runs, scaled using
+their medians. If parameter transformations were done by mkin (default in
+<a href="saem.html">saem</a>), then the parameters found by saem are on the transformed scale, and
+scaling is simply done by subtracting the median. If parameter
+transformations were done by saemix, scaling is done by dividing by the
+median, as in the paper by Duchesne et al. (2021).</p>
+ </div>
+
+ <div id="ref-usage">
+ <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">parhist</span><span class="op">(</span><span class="va">object</span>, lpos <span class="op">=</span> <span class="st">"topleft"</span>, main <span class="op">=</span> <span class="st">""</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
+ </div>
+
+ <div id="arguments">
+ <h2>Arguments</h2>
+ <dl><dt>object</dt>
+<dd><p>The <a href="multistart.html">multistart</a> object</p></dd>
+
+
+<dt>lpos</dt>
+<dd><p>Positioning of the legend.</p></dd>
+
+
+<dt>main</dt>
+<dd><p>Title of the plot</p></dd>
+
+
+<dt>...</dt>
+<dd><p>Passed to <a href="https://rdrr.io/r/graphics/boxplot.html" class="external-link">boxplot</a></p></dd>
+
+</dl></div>
+ <div id="references">
+ <h2>References</h2>
+ <p>Duchesne R, Guillemin A, Gandrillon O, Crauste F. Practical
+identifiability in the frame of nonlinear mixed effects models: the example
+of the in vitro erythropoiesis. BMC Bioinformatics. 2021 Oct 4;22(1):478.
+doi: 10.1186/s12859-021-04373-4.</p>
+ </div>
+ <div id="see-also">
+ <h2>See also</h2>
+ <div class="dont-index"><p><a href="multistart.html">multistart</a></p></div>
+ </div>
+
+ </div>
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