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1 files changed, 30 insertions, 19 deletions
diff --git a/docs/reference/mkinerrmin.html b/docs/reference/mkinerrmin.html
index 97616a41..678750cd 100644
--- a/docs/reference/mkinerrmin.html
+++ b/docs/reference/mkinerrmin.html
@@ -6,8 +6,7 @@
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
-<title>
- — mkinerrmin • mkin</title>
+<title>Calculate the minimum error to assume in order to pass the variance test — mkinerrmin • mkin</title>
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@@ -26,12 +25,14 @@
<script src="../pkgdown.js"></script>
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-<script src='https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML'></script>
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@@ -71,6 +72,9 @@
<li>
<a href="../articles/compiled_models.html">Performance benefit by using compiled model definitions in mkin</a>
</li>
+ <li>
+ <a href="../articles/twa.html">Calculation of time weighted average concentrations with mkin</a>
+ </li>
</ul>
</li>
<li>
@@ -96,8 +100,7 @@
<div class="row">
<div class="col-md-9 contents">
<div class="page-header">
- <h1>
-</h1>
+ <h1>Calculate the minimum error to assume in order to pass the variance test</h1>
</div>
@@ -105,25 +108,33 @@
chi-squared test as defined in the FOCUS kinetics report from 2006.</p>
- <pre><span class='fu'>mkinerrmin</span>(<span class='no'>fit</span>, <span class='kw'>alpha</span> <span class='kw'>=</span> <span class='fl'>0.05</span>)</pre>
+ <pre class="usage"><span class='fu'>mkinerrmin</span>(<span class='no'>fit</span>, <span class='kw'>alpha</span> <span class='kw'>=</span> <span class='fl'>0.05</span>)</pre>
<h2 class="hasAnchor" id="arguments"><a class="anchor" href="#arguments"></a> Arguments</h2>
- <dl class="dl-horizontal">
- <dt>fit</dt>
- <dd>
- an object of class <code><a href='mkinfit.html'>mkinfit</a></code>.
- </dd>
- <dt>alpha</dt>
- <dd>
- The confidence level chosen for the chi-squared test.
-</dd>
- </dl>
+ <table class="ref-arguments">
+ <colgroup><col class="name" /><col class="desc" /></colgroup>
+ <tr>
+ <th>fit</th>
+ <td><p>an object of class <code><a href='mkinfit.html'>mkinfit</a></code>.</p></td>
+ </tr>
+ <tr>
+ <th>alpha</th>
+ <td><p>The confidence level chosen for the chi-squared test.</p></td>
+ </tr>
+ </table>
<h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2>
<p>A dataframe with the following components:</p>
- <p>The dataframe has one row for the total dataset and one further row for
- each observed state variable in the model.</p>
+<dt>err.min</dt><dd><p>The relative error, expressed as a fraction.</p></dd>
+ <dt>n.optim</dt><dd><p>The number of optimised parameters attributed to the data series.</p></dd>
+ <dt>df</dt><dd><p>The number of remaining degrees of freedom for the chi2 error level
+ calculations. Note that mean values are used for the chi2 statistic and
+ therefore every time point with observed values in the series only counts
+ one time.</p></dd>
+ The dataframe has one row for the total dataset and one further row for
+ each observed state variable in the model.
+
<h2 class="hasAnchor" id="details"><a class="anchor" href="#details"></a>Details</h2>
@@ -135,7 +146,7 @@ chi-squared test as defined in the FOCUS kinetics report from 2006.</p>
Degradation Kinetics from Environmental Fate Studies on Pesticides in EU
Registration&#8221; Report of the FOCUS Work Group on Degradation Kinetics,
EC Document Reference Sanco/10058/2005 version 2.0, 434 pp,
- <a href = 'http://focus.jrc.ec.europa.eu/dk'>http://focus.jrc.ec.europa.eu/dk</a></p>
+ <a href = 'http://esdac.jrc.europa.eu/projects/degradation-kinetics'>http://esdac.jrc.europa.eu/projects/degradation-kinetics</a></p>
<h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>

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