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Diffstat (limited to 'log/test.log')
| -rw-r--r-- | log/test.log | 35 |
1 files changed, 18 insertions, 17 deletions
diff --git a/log/test.log b/log/test.log index e1726492..33ee7dfd 100644 --- a/log/test.log +++ b/log/test.log @@ -1,44 +1,45 @@ ℹ Testing mkin ✔ | F W S OK | Context ✔ | 5 | AIC calculation -✔ | 5 | Analytical solutions for coupled models [1.6s] +✔ | 5 | Analytical solutions for coupled models [2.8s] ✔ | 5 | Calculation of Akaike weights ✔ | 3 | Export dataset for reading into CAKE -✔ | 6 | Use of precompiled symbols in mkinpredict [3.7s] +✔ | 6 | Use of precompiled symbols in mkinpredict [4.7s] ✔ | 12 | Confidence intervals and p-values ✔ | 1 | Solutions with deSolve -✔ | 1 12 | Dimethenamid data from 2018 [14.0s] -✔ | 14 | Error model fitting [2.7s] +✔ | 1 12 | Dimethenamid data from 2018 [24.3s] +✔ | 4 | DTx calculations +✔ | 14 | Error model fitting [4.0s] ✔ | 5 | Time step normalisation ✔ | 4 | Calculation of FOCUS chi2 error levels ✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) ✔ | 4 | Test fitting the decline of metabolites from their maximum ✔ | 1 | Fitting the logistic model -✔ | 10 | Batch fitting and diagnosing hierarchical kinetic models [20.5s] -✔ | 2 20 | Nonlinear mixed-effects models [142.6s] +✔ | 10 | Batch fitting and diagnosing hierarchical kinetic models [37.9s] +✔ | 2 20 | Nonlinear mixed-effects models [283.3s] ✔ | 3 | Test dataset classes mkinds and mkindsg ✔ | 10 | Special cases of mkinfit calls ✔ | 3 | mkinfit features ✔ | 8 | mkinmod model generation and printing ✔ | 4 | Model predictions with mkinpredict -✔ | 12 | Multistart method for saem.mmkin models [23.8s] -✔ | 16 | Evaluations according to 2015 NAFTA guidance [1.5s] -✔ | 9 | Nonlinear mixed-effects models with nlme [4.0s] -✔ | 15 | Plotting [4.9s] +✔ | 12 | Multistart method for saem.mmkin models [41.8s] +✔ | 16 | Evaluations according to 2015 NAFTA guidance [2.6s] +✔ | 9 | Nonlinear mixed-effects models with nlme [7.6s] +✔ | 15 | Plotting [9.1s] ✔ | 4 | Residuals extracted from mkinfit models -✔ | 1 38 | saemix parent models [36.1s] +✔ | 1 38 | saemix parent models [66.6s] ✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper ✔ | 11 | Processing of residue series -✔ | 10 | Fitting the SFORB model [1.7s] +✔ | 10 | Fitting the SFORB model [3.0s] ✔ | 1 | Summaries of old mkinfit objects ✔ | 5 | Summary -✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) -✔ | 9 | Hypothesis tests [2.8s] -✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) +✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [1.5s] +✔ | 9 | Hypothesis tests [5.3s] +✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [1.5s] ✔ | 2 | water-sediment ══ Results ═════════════════════════════════════════════════════════════════════ -Duration: 265.7 s +Duration: 503.1 s ── Skipped tests (4) ─────────────────────────────────────────────────────────── • Fitting this ODE model with saemix takes about 5 minutes on my new system @@ -49,4 +50,4 @@ Duration: 265.7 s • This still takes almost 2.5 minutes although we do not solve ODEs (1): 'test_saemix_parent.R:143:3' -[ FAIL 0 | WARN 0 | SKIP 4 | PASS 291 ] +[ FAIL 0 | WARN 0 | SKIP 4 | PASS 295 ] |