diff options
Diffstat (limited to 'man')
| -rw-r--r-- | man/D24_2014.Rd | 10 | ||||
| -rw-r--r-- | man/mkinds.Rd | 2 | ||||
| -rw-r--r-- | man/mkindsg.Rd | 5 | ||||
| -rw-r--r-- | man/saem.Rd | 8 |
4 files changed, 21 insertions, 4 deletions
diff --git a/man/D24_2014.Rd b/man/D24_2014.Rd index d555d348..59ea5a9e 100644 --- a/man/D24_2014.Rd +++ b/man/D24_2014.Rd @@ -46,6 +46,16 @@ m_D24_2 = mkinmod(D24 = mkinsub("DFOP", to = "DCP"), DCP = mkinsub("SFO", to = "DCA"), DCA = mkinsub("SFO")) print(m_D24_2) +D24_2014_data <- lapply(D24_2014$ds, function(x) x$data) +names(D24_2014_data) <- sapply(D24_2014$ds, function(x) x$title) +f_D24_2014 <- mmkin( + models = list( + "SFO-SFO-SFO" = m_D24, + "DFOP-SFO-SFO" = m_D24_2), + data = D24_2014_data, + quiet = TRUE) +print(f_D24_2014) +plot(f_D24_2014[, 3]) } } \keyword{datasets} diff --git a/man/mkinds.Rd b/man/mkinds.Rd index a822bf80..a2c58300 100644 --- a/man/mkinds.Rd +++ b/man/mkinds.Rd @@ -17,7 +17,7 @@ \description{ At the moment this dataset class is hardly used in mkin. For example, mkinfit does not take mkinds datasets as argument, but works with dataframes -such as the on contained in the data field of mkinds objects. Some datasets +such as the one contained in the data field of mkinds objects. Some datasets provided by this package come as mkinds objects nevertheless. } \examples{ diff --git a/man/mkindsg.Rd b/man/mkindsg.Rd index 3eee5562..3b6a9f61 100644 --- a/man/mkindsg.Rd +++ b/man/mkindsg.Rd @@ -23,6 +23,11 @@ so that combined evaluations are desirable. Time normalisation factors are initialised with a value of 1 for each dataset if no data are supplied. } +\note{ +Currently, no functions making use of the defined class structure +are available in this package. Refer to \link{D24_2014} for an example +dataset in this structure, with some example evaluations. +} \examples{ mdsg <- mkindsg$new("Experimental X", experimental_data_for_UBA_2019[6:10]) diff --git a/man/saem.Rd b/man/saem.Rd index 5d42f1b1..5a125ab6 100644 --- a/man/saem.Rd +++ b/man/saem.Rd @@ -204,9 +204,11 @@ print(f_saem_dfop_sfo) plot(f_saem_dfop_sfo) summary(f_saem_dfop_sfo, data = TRUE) -# The following takes about 6 minutes -f_saem_dfop_sfo_deSolve <- saem(f_mmkin["DFOP-SFO", ], solution_type = "deSolve", - nbiter.saemix = c(200, 80)) +# The following took about 6 minutes and currently fails with +# "Error in deSolve::lsoda(y = odeini, times = outtimes_deSolve, func = lsoda_func, : +# illegal input detected before taking any integration steps - see written message" +#f_saem_dfop_sfo_deSolve <- saem(f_mmkin["DFOP-SFO", ], solution_type = "deSolve", +# nbiter.saemix = c(200, 80)) #anova( # f_saem_dfop_sfo, |