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-rw-r--r--tests/testthat/setup_script.R14
1 files changed, 14 insertions, 0 deletions
diff --git a/tests/testthat/setup_script.R b/tests/testthat/setup_script.R
index 81f9248d..1bedbf65 100644
--- a/tests/testthat/setup_script.R
+++ b/tests/testthat/setup_script.R
@@ -158,3 +158,17 @@ mmkin_biphasic_mixed <- mixed(mmkin_biphasic)
nlme_biphasic <- nlme(mmkin_biphasic)
saem_biphasic_m <- saem(mmkin_biphasic, transformations = "mkin", quiet = TRUE)
saem_biphasic_s <- saem(mmkin_biphasic, transformations = "saemix", quiet = TRUE)
+
+ds_uba <- lapply(experimental_data_for_UBA_2019[6:10],
+ function(x) subset(x$data[c("name", "time", "value")]))
+names(ds_uba) <- paste("Dataset", 6:10)
+sfo_sfo_uba <- mkinmod(parent = mkinsub("SFO", "A1"),
+ A1 = mkinsub("SFO"))
+dfop_sfo_uba <- mkinmod(parent = mkinsub("DFOP", "A1"),
+ A1 = mkinsub("SFO"))
+f_uba_mmkin <- mmkin(list("SFO-SFO" = sfo_sfo_uba, "DFOP-SFO" = dfop_sfo_uba),
+ ds_uba, quiet = TRUE)
+f_uba_dfop_sfo_mixed <- mixed(f_uba_mmkin[2, ])
+f_uba_sfo_sfo_saem <- saem(f_uba_mmkin["SFO-SFO", ], quiet = TRUE, transformations = "saemix")
+#f_uba_sfo_sfo_saem <- saem(f_uba_mmkin["SFO-SFO", ], solution_type = "deSolve", quiet = TRUE) # currently fails
+f_uba_dfop_sfo_saem <- saem(f_uba_mmkin["DFOP-SFO", ], quiet = TRUE, transformations = "saemix")

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