aboutsummaryrefslogtreecommitdiff
path: root/vignettes/web_only
diff options
context:
space:
mode:
Diffstat (limited to 'vignettes/web_only')
-rw-r--r--vignettes/web_only/multistart.rmd6
1 files changed, 3 insertions, 3 deletions
diff --git a/vignettes/web_only/multistart.rmd b/vignettes/web_only/multistart.rmd
index 94f4ef98..27a8a96a 100644
--- a/vignettes/web_only/multistart.rmd
+++ b/vignettes/web_only/multistart.rmd
@@ -40,7 +40,7 @@ with different starting values.
```{r}
f_saem_full_multi <- multistart(f_saem_full, n = 16, cores = 16)
-parhist(f_saem_full_multi)
+parplot(f_saem_full_multi)
```
This confirms that the variance of k2 is the most problematic parameter, so we
@@ -51,7 +51,7 @@ for k2.
f_saem_reduced <- update(f_saem_full, no_random_effect = "log_k2")
illparms(f_saem_reduced)
f_saem_reduced_multi <- multistart(f_saem_reduced, n = 16, cores = 16)
-parhist(f_saem_reduced_multi, lpos = "topright")
+parplot(f_saem_reduced_multi, lpos = "topright")
```
The results confirm that all remaining parameters can be determined with sufficient
@@ -67,7 +67,7 @@ The parameter histograms can be further improved by excluding the result with
the low likelihood.
```{r}
-parhist(f_saem_reduced_multi, lpos = "topright", llmin = -326, ylim = c(0.5, 2))
+parplot(f_saem_reduced_multi, lpos = "topright", llmin = -326, ylim = c(0.5, 2))
```
We can use the `anova` method to compare the models, including a likelihood ratio

Contact - Imprint