5 files changed, 137 insertions, 15 deletions
diff --git a/vignettes/mkin.html b/vignettes/mkin.html
index 0d5ed6fc..38c44a0f 100644
--- a/vignettes/mkin.html
+++ b/vignettes/mkin.html
@@ -1599,7 +1599,7 @@ div.tocify {
 
 <h1 class="title toc-ignore">Introduction to mkin</h1>
 <h4 class="author">Johannes Ranke</h4>
-<h4 class="date">Last change 15 February 2021 (rebuilt 2022-07-12)</h4>
+<h4 class="date">Last change 15 February 2021 (rebuilt 2022-11-15)</h4>
 
 </div>
 
diff --git a/vignettes/web_only/benchmarks.html b/vignettes/web_only/benchmarks.html
index 5f81f39f..5376c1f5 100644
--- a/vignettes/web_only/benchmarks.html
+++ b/vignettes/web_only/benchmarks.html
@@ -1599,7 +1599,7 @@ div.tocify {
 
 <h1 class="title toc-ignore">Benchmark timings for mkin</h1>
 <h4 class="author">Johannes Ranke</h4>
-<h4 class="date">Last change 14 July 2022 (rebuilt 2022-07-14)</h4>
+<h4 class="date">Last change 14 July 2022 (rebuilt 2022-11-15)</h4>
 
 </div>
 
@@ -1635,7 +1635,7 @@ FOMC_SFO &lt;- mkinmod(
   parent = mkinsub(&quot;FOMC&quot;, &quot;m1&quot;),
   m1 = mkinsub(&quot;SFO&quot;))
 DFOP_SFO &lt;- mkinmod(
-  parent = mkinsub(&quot;FOMC&quot;, &quot;m1&quot;),
+  parent = mkinsub(&quot;FOMC&quot;, &quot;m1&quot;), # erroneously used FOMC twice, not fixed for consistency
   m1 = mkinsub(&quot;SFO&quot;))
 t3 &lt;- system.time(mmkin_bench(list(SFO_SFO, FOMC_SFO, DFOP_SFO), list(FOCUS_D)))[[&quot;elapsed&quot;]]
 t4 &lt;- system.time(mmkin_bench(list(SFO_SFO, FOMC_SFO, DFOP_SFO), list(FOCUS_D),
@@ -1816,6 +1816,30 @@ t11 &lt;- system.time(mmkin_bench(list(m_synth_DFOP_par), list(DFOP_par_c),
 <td align="right">1.770</td>
 <td align="right">3.377</td>
 </tr>
+<tr class="odd">
+<td align="left">Linux</td>
+<td align="left">Ryzen 7 1700</td>
+<td align="left">4.2.1</td>
+<td align="left">1.1.2</td>
+<td align="right">1.957</td>
+<td align="right">3.633</td>
+</tr>
+<tr class="even">
+<td align="left">Linux</td>
+<td align="left">Ryzen 7 1700</td>
+<td align="left">4.2.2</td>
+<td align="left">1.2.0</td>
+<td align="right">2.129</td>
+<td align="right">3.784</td>
+</tr>
+<tr class="odd">
+<td align="left">Linux</td>
+<td align="left">Ryzen 7 1700</td>
+<td align="left">4.2.2</td>
+<td align="left">1.3.0</td>
+<td align="right">2.046</td>
+<td align="right">3.693</td>
+</tr>
 </tbody>
 </table>
 </div>
@@ -1979,6 +2003,33 @@ t11 &lt;- system.time(mmkin_bench(list(m_synth_DFOP_par), list(DFOP_par_c),
 <td align="right">5.758</td>
 <td align="right">2.558</td>
 </tr>
+<tr class="odd">
+<td align="left">Linux</td>
+<td align="left">Ryzen 7 1700</td>
+<td align="left">4.2.1</td>
+<td align="left">1.1.2</td>
+<td align="right">1.503</td>
+<td align="right">6.147</td>
+<td align="right">2.803</td>
+</tr>
+<tr class="even">
+<td align="left">Linux</td>
+<td align="left">Ryzen 7 1700</td>
+<td align="left">4.2.2</td>
+<td align="left">1.2.0</td>
+<td align="right">1.559</td>
+<td align="right">6.097</td>
+<td align="right">2.841</td>
+</tr>
+<tr class="odd">
+<td align="left">Linux</td>
+<td align="left">Ryzen 7 1700</td>
+<td align="left">4.2.2</td>
+<td align="left">1.3.0</td>
+<td align="right">1.230</td>
+<td align="right">4.333</td>
+<td align="right">2.187</td>
+</tr>
 </tbody>
 </table>
 </div>
@@ -2193,6 +2244,42 @@ t11 &lt;- system.time(mmkin_bench(list(m_synth_DFOP_par), list(DFOP_par_c),
 <td align="right">1.744</td>
 <td align="right">2.566</td>
 </tr>
+<tr class="odd">
+<td align="left">Linux</td>
+<td align="left">Ryzen 7 1700</td>
+<td align="left">4.2.1</td>
+<td align="left">1.1.2</td>
+<td align="right">0.861</td>
+<td align="right">1.295</td>
+<td align="right">1.507</td>
+<td align="right">3.102</td>
+<td align="right">1.961</td>
+<td align="right">2.852</td>
+</tr>
+<tr class="even">
+<td align="left">Linux</td>
+<td align="left">Ryzen 7 1700</td>
+<td align="left">4.2.2</td>
+<td align="left">1.2.0</td>
+<td align="right">0.911</td>
+<td align="right">1.328</td>
+<td align="right">1.519</td>
+<td align="right">2.986</td>
+<td align="right">1.957</td>
+<td align="right">2.769</td>
+</tr>
+<tr class="odd">
+<td align="left">Linux</td>
+<td align="left">Ryzen 7 1700</td>
+<td align="left">4.2.2</td>
+<td align="left">1.3.0</td>
+<td align="right">0.693</td>
+<td align="right">0.996</td>
+<td align="right">1.121</td>
+<td align="right">2.174</td>
+<td align="right">1.427</td>
+<td align="right">2.026</td>
+</tr>
 </tbody>
 </table>
 </div>
diff --git a/vignettes/web_only/mkin_benchmarks.rda b/vignettes/web_only/mkin_benchmarks.rda
index 2d3deb26..c07def65 100644
--- a/vignettes/web_only/mkin_benchmarks.rda
+++ b/vignettes/web_only/mkin_benchmarks.rda
diff --git a/vignettes/web_only/saem_benchmarks.html b/vignettes/web_only/saem_benchmarks.html
index 4875bb1b..714dc1ff 100644
--- a/vignettes/web_only/saem_benchmarks.html
+++ b/vignettes/web_only/saem_benchmarks.html
@@ -1599,7 +1599,7 @@ div.tocify {
 
 <h1 class="title toc-ignore">Benchmark timings for saem.mmkin</h1>
 <h4 class="author">Johannes Ranke</h4>
-<h4 class="date">Last change 14 November 2022 (rebuilt 2022-11-14)</h4>
+<h4 class="date">Last change 14 November 2022 (rebuilt 2022-11-15)</h4>
 
 </div>
 
@@ -1781,10 +1781,20 @@ t11 &lt;- system.time(sforb_sfo3_plus_const &lt;- saem(three_met_sep_tc[&quot;SF
 <td align="left">Linux</td>
 <td align="left">1.2.0</td>
 <td align="left">3.2</td>
-<td align="right">2.996</td>
-<td align="right">5.207</td>
-<td align="right">5.317</td>
-<td align="right">5.171</td>
+<td align="right">2.110</td>
+<td align="right">4.632</td>
+<td align="right">4.264</td>
+<td align="right">4.930</td>
+</tr>
+<tr class="even">
+<td align="left">Ryzen 7 1700</td>
+<td align="left">Linux</td>
+<td align="left">1.3.0</td>
+<td align="left">3.2</td>
+<td align="right">2.394</td>
+<td align="right">4.748</td>
+<td align="right">4.883</td>
+<td align="right">4.937</td>
 </tr>
 </tbody>
 </table>
@@ -1808,10 +1818,20 @@ t11 &lt;- system.time(sforb_sfo3_plus_const &lt;- saem(three_met_sep_tc[&quot;SF
 <td align="left">Linux</td>
 <td align="left">1.2.0</td>
 <td align="left">3.2</td>
-<td align="right">5.671</td>
-<td align="right">7.696</td>
-<td align="right">8.166</td>
-<td align="right">8.168</td>
+<td align="right">5.602</td>
+<td align="right">7.373</td>
+<td align="right">7.815</td>
+<td align="right">7.831</td>
+</tr>
+<tr class="even">
+<td align="left">Ryzen 7 1700</td>
+<td align="left">Linux</td>
+<td align="left">1.3.0</td>
+<td align="left">3.2</td>
+<td align="right">5.622</td>
+<td align="right">7.445</td>
+<td align="right">8.297</td>
+<td align="right">7.740</td>
 </tr>
 </tbody>
 </table>
@@ -1836,8 +1856,16 @@ t11 &lt;- system.time(sforb_sfo3_plus_const &lt;- saem(three_met_sep_tc[&quot;SF
 <td align="left">Linux</td>
 <td align="left">1.2.0</td>
 <td align="left">3.2</td>
-<td align="right">24.883</td>
-<td align="right">818.157</td>
+<td align="right">24.014</td>
+<td align="right">749.699</td>
+</tr>
+<tr class="even">
+<td align="left">Ryzen 7 1700</td>
+<td align="left">Linux</td>
+<td align="left">1.3.0</td>
+<td align="left">3.2</td>
+<td align="right">24.480</td>
+<td align="right">519.087</td>
 </tr>
 </tbody>
 </table>
@@ -1861,7 +1889,14 @@ t11 &lt;- system.time(sforb_sfo3_plus_const &lt;- saem(three_met_sep_tc[&quot;SF
 <td align="left">Linux</td>
 <td align="left">1.2.0</td>
 <td align="left">3.2</td>
-<td align="right">1355.036</td>
+<td align="right">1249.834</td>
+</tr>
+<tr class="even">
+<td align="left">Ryzen 7 1700</td>
+<td align="left">Linux</td>
+<td align="left">1.3.0</td>
+<td align="left">3.2</td>
+<td align="right">944.471</td>
 </tr>
 </tbody>
 </table>
diff --git a/vignettes/web_only/saem_benchmarks.rda b/vignettes/web_only/saem_benchmarks.rda
index e8b139da..992b58cf 100644
--- a/vignettes/web_only/saem_benchmarks.rda
+++ b/vignettes/web_only/saem_benchmarks.rda