| Age | Commit message (Collapse) | Author | Files | Lines | |
|---|---|---|---|---|---|
| 2014-07-24 | Improve formulation | Johannes Ranke | 1 | -1/+1 | |
| 2014-07-24 | Semantic correction in help file | Johannes Ranke | 1 | -1/+1 | |
| 2014-07-24 | Bump version, better default for state.ini | Johannes Ranke | 4 | -3/+16 | |
| 2014-07-24 | Update vignettes with 0.9-32 just released to CRAN | Johannes Ranke | 3 | -39/+33 | |
| 2014-07-24 | Avoid artificial zero residual in mkinresplot | Johannes Ranke | 3 | -2/+5 | |
| 2014-07-23 | Parallel metabolite formation with formation fractions in mkinerrmin | Johannes Ranke | 4 | -4/+10 | |
| 2014-07-22 | Formatting TODO | Johannes Ranke | 1 | -0/+1 | |
| 2014-07-21 | Ignore vignette build timestamp | Johannes Ranke | 1 | -0/+1 | |
| 2014-07-21 | Residual plots are important | Johannes Ranke | 1 | -0/+1 | |
| 2014-07-21 | Simplify usage examples | Johannes Ranke | 1 | -17/+16 | |
| 2014-07-21 | Bugfix, model shorthand, state.ini[[1]] from observed data | Johannes Ranke | 11 | -231/+279 | |
| - The bug occurred when using transform_rates=FALSE for FOMC, DFOP or HS - Make it possible to use mkinfit("SFO", ...) - Take initial mean value at time zero for the variable with the highest value in the observed data - Update of vignette/FOCUS_L - Improve the Makefile to build single vignettes | |||||
| 2014-07-17 | Return complete list of initial states after fitting | Johannes Ranke | 1 | -1/+4 | |
| This is useful for specifying state.ini in a subsequent call to mkinfit | |||||
| 2014-07-17 | Handle non-convergence and maximum number of iterations | Johannes Ranke | 7 | -95/+190 | |
| For details see NEWS.md | |||||
| 2014-07-16 | Merge branch 'master' into iore | Johannes Ranke | 3 | -3/+34 | |
| 2014-07-16 | Insert empty lines to have R make separate entries | Johannes Ranke | 1 | -0/+30 | |
| 2014-07-14 | Small improvements to usage examples | Johannes Ranke | 1 | -2/+3 | |
| 2014-07-14 | Vignettes as just synced to the static documentation on r-forge | Johannes Ranke | 3 | -27/+21 | |
| 2014-07-14 | Fix syncinc with r-forge | Johannes Ranke | 1 | -1/+1 | |
| 2014-07-14 | Bump version as 0.9-31 was released today | Johannes Ranke | 1 | -1/+1 | |
| 2014-07-14 | Merge bugfix branch 'master' into iore | Johannes Ranke | 8 | -109/+1212 | |
| Add IORE support to mkinerrmin | |||||
| 2014-07-14 | Nearly complete support for IORE, pending mkinerrmin | Johannes Ranke | 9 | -30/+98 | |
| 2014-07-14 | Merge bugfix release 0.9-31 from 'master' into iore | Johannes Ranke | 2 | -2/+2 | |
| 2014-07-14 | Bugfix release version 0.9-31 | Johannes Ranke | 8 | -30/+1136 | |
| 2014-07-12 | First working fits with IORE model | Johannes Ranke | 8 | -11/+86 | |
| 2014-07-11 | It is B. Mikolasch, not M. Mikolasch... | Johannes Ranke | 2 | -2/+2 | |
| 2014-07-11 | Update of syncing to r-forge without git-svn | Johannes Ranke | 1 | -15/+12 | |
| 2014-07-11 | Update the date | Johannes Ranke | 1 | -1/+1 | |
| 2014-07-11 | Improve formatting in FOCUS_L vignette, rebuild vignettes | Johannes Ranke | 28 | -0/+5 | |
| 2014-07-07 | Coefficient matrix for formation fractions, no sink and one pathway | Johannes Ranke | 1 | -22/+26 | |
| 2014-07-03 | Add a more complex usage example | Johannes Ranke | 1 | -1/+17 | |
| 2014-07-02 | Update of vignettes | Johannes Ranke | 16 | -0/+0 | |
| 2014-07-02 | Do not introduce formation fractions for singular pathways | Johannes Ranke | 2 | -27/+29 | |
| - As a consequence, we do not need implicit formation fractions in mkinfit | |||||
| 2014-07-02 | Warning -> message, and only if initial parameter was not 1 | Johannes Ranke | 1 | -2/+4 | |
| 2014-07-02 | Set implicit formation fraction to 1 even if set otherwise in parms.ini | Johannes Ranke | 1 | -6/+8 | |
| 2014-07-02 | Internal parameter transformations are optional | Johannes Ranke | 1 | -2/+2 | |
| 2014-07-02 | Update vignettes - working flawlessly now! | Johannes Ranke | 16 | -0/+0 | |
| 2014-07-02 | Move handling of implicitly fixed formation fractions to mkinfit | Johannes Ranke | 2 | -19/+11 | |
| 2014-07-02 | Typo | Johannes Ranke | 1 | -1/+1 | |
| 2014-07-02 | Support formation fractions without sink pathway, updates | Johannes Ranke | 12 | -197/+317 | |
| 2014-07-01 | One more source code comment | Johannes Ranke | 1 | -0/+2 | |
| 2014-07-01 | One more check, update source code comment | Johannes Ranke | 1 | -2/+3 | |
| 2014-06-30 | Link to the gmkin page on github | Johannes Ranke | 1 | -1/+1 | |
| 2014-06-30 | Put the hint to the github commit log to the end | Johannes Ranke | 1 | -2/+4 | |
| 2014-06-30 | Format the NEWS file in markdown, add Makefile target | Johannes Ranke | 5 | -132/+74 | |
| 2014-06-28 | Rename ChangeLog to NEWS, new entry style, Makefile update | Johannes Ranke | 2 | -1/+16 | |
| 2014-06-27 | Reorder endpoints in R/endpoints.R, update vignettes | Johannes Ranke | 18 | -3/+3 | |
| 2014-06-27 | Comment using the additional DT50 values at least once | Johannes Ranke | 1 | -2/+8 | |
| 2014-06-27 | Reorganize the summary in a more logical order | Johannes Ranke | 1 | -19/+19 | |
| 2014-06-27 | Add vignettes target, reorganize | Johannes Ranke | 1 | -17/+23 | |
| 2014-06-27 | Show the upload date and time for winbuilder | Johannes Ranke | 1 | -0/+1 | |
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index : mkin | |
| Fitting kinetic models to chemical degradation data (also on github) | Johannes Ranke |
| aboutsummaryrefslogtreecommitdiff |