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18 hoursCheck and test locallyHEADmainJohannes Ranke160-3473/+2387
2025-03-28Make parent model selection more robustdevJohannes Ranke1-1/+1
In case one of the fits failed, the corresponding entry in `aic_parent` is `NA`, so we need to tell the `min()` function to ignore `NA` values instead of returning and empty result.
2025-02-16Fix solution type "deSolve" for a special caseJohannes Ranke40-699/+758
The special case occurs if not observed data for time zero are available. Fixes #16. Write NEWS and update docs. A lot of html was regenerated, because I had checked out the main branch in between, which made pkgdown believe that I have changed the help files.
2025-02-16Some test improvementsJohannes Ranke2-1/+15
- Another test for analytical solution of SFO-SFO This is a bit redundant, because we have tests using those solutions in test_analytical.R, where mkinfit is used. But nevertheless, it is good to know that using mkinpredict directly also passes the test. - A more explicit testing of the warning message that is issued if a use turns of transformation of formation fractions
2025-02-14Initialize dev docsJohannes Ranke533-3/+61441
2025-02-14Merge branch 'main' into devJohannes Ranke1058-102058/+122601
2025-02-14Add coverage report to docsJohannes Ranke25-0/+85059
2025-02-13Removed html versions of prebuilt vignettesv1.2.9Johannes Ranke5-13290/+1
2025-02-13Axis legend formatting, update vignettesJohannes Ranke954-176583/+33193
2025-02-13Install the prebuilt cyantraniliprole vignetteJohannes Ranke1-0/+7
2025-02-13Improve legend in parplots of multistart objectsJohannes Ranke2-170/+178
2025-02-13Restrict number of cores for CRAN checksJohannes Ranke1-1/+1
2025-02-13Update docsJohannes Ranke3-15/+4
2025-02-13Merge branch 'devel'Johannes Ranke19-294/+375
2025-02-13Avoid note about spellingJohannes Ranke1-1/+1
2025-02-13Update wordlist, bump date and simplify DESCRIPTIONJohannes Ranke19-297/+374
Also, the R-Universe URL that the badge points to is updated
2024-12-19Skip small symbols in plot.mixed()Ranke Johannes2-2/+2
2024-12-19Plot mixed models with more than 25 datasetsRanke Johannes3-2/+4
Closes #15
2024-12-19Support observed data as tibbleRanke Johannes9-392/+402
Closes #14
2024-09-06Merge remote-tracking branch 'refs/remotes/origin/main'Ranke Johannes134-2153/+86697
2024-09-06Support covariate models in parplot.multistartRanke Johannes3-8/+15
Also, filter negative scaled parameter values for plotting, with a warning.
2024-07-29Add coverage report for pkgdown pageJohannes Ranke26-1/+84996
2024-07-29Move coverage to pkgdown docsJohannes Ranke102-2202/+1671
The coverage report is neither successful on Travis nor in the github workflow set up with the usethis package. Therefore the code coverage report is generated locally and linked into the pkgdown docs.
2024-07-28Move coverage report from travis to github actionsJohannes Ranke6-4/+82
2024-07-28Make sure test work on my desktop, skip more tests on travisJohannes Ranke3-9/+11
2024-07-24Go back to the only version that worked onceRanke Johannes1-2/+2
2024-07-24Another attemptRanke Johannes1-1/+1
2024-07-24Try to fit in 50 minutes travis build timeRanke Johannes1-1/+1
2024-07-23And one moreRanke Johannes1-2/+2
2024-07-23And another try with travisRanke Johannes1-1/+1
2024-07-23Yet another go at travisRanke Johannes1-2/+2
2024-07-2330 minutes for coverage did not suffice for travisRanke Johannes1-1/+1
2024-07-23Go back to 30 minutes for coverageRanke Johannes1-1/+1
Apparently, the problem was the log silence timeout of 10 minutes on my repository, thankfully the travis support increased it to 30 minutes.
2024-07-23Another attempt to fix coverage on travisRanke Johannes1-1/+1
2024-07-23Try to convince travis to complete the coverage reportRanke Johannes1-1/+1
2024-07-22Update travis build status badgeRanke Johannes1-1/+1
2024-07-22Merge remote-tracking branch 'refs/remotes/origin/main'Ranke Johannes12-41/+80
2024-05-02Add empty spreadsheet for entering dataRanke Johannes1-0/+0
2024-04-27Fix bug in R/create_deg_func.RJohannes Ranke12-41/+80
Closes #13
2023-11-26Deal with 'saem' fits failing when updating an 'mhmkin' objectJohannes Ranke8-32/+68
2023-11-25Bump the date to trigger build on TravisJohannes Ranke1-1/+1
They refilled my credits, thanks for that!
2023-11-23Bump version, fix test from last commit, check and testJohannes Ranke6-136/+68
2023-11-23fix: 'R/illparms.R': An ill-defined random effect is now also found if there ↵Johannes Ranke3-5/+38
is only one random effect in the model. Also add a test for this.
2023-11-16Update pkgdown docs to bootstrap 5 with searchJohannes Ranke315-13204/+20683
2023-11-02Merge branch 'main' into devJohannes Ranke5-4/+68
2023-11-02Benchmarks on new CPU with current versionsJohannes Ranke5-4/+68
2023-11-02Merge branch 'main' into devJohannes Ranke238-1049/+1360
2023-10-30Update static docsRanke Johannes236-993/+1269
2023-10-30The UBA Report on the template is publishedRanke Johannes2-56/+91
Also, add a long overdue reference to previous work in population based modelling of degradation data.
2023-10-14Merge branch 'main' into devJohannes Ranke1-1/+2

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