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This is about twice as fast as deSolve compiled with FOCUS D
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also for deSolve and eigenvalue based solutions. This noticeably increases
performance for these methods, see test.log and benchmark vignette.
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Still in preparation for analytical solutions of coupled models
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- Combine R/*.solution.R into R/parent_solutions.R
- Create a roxygen family of related functions
- Reduce redundancy by using the inherit tag
- Change the parent.0 argument to parent_0 to match
the corresponding parameter name used in mkinfit
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Static documentation rebuilt by pkgdown
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- Reconcile docs and code for max_twa_parent
- Correct links to docs in twa vignette
- Static documentation rebuilt by pkgdown
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The new algorithm tries direct optimization of the likelihood, as well
as a three step procedure. In this way, we consistently get the
model with the highest likelihood for SFO, DFOP and HS for all 12
new test datasets.
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- Write the NEWS
- Static documentation rebuilt by pkgdown
- Adapt mkinerrmin
- Fix (hopefully all) remaining problems in mkinfit
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Also:
- Change rounding in print.nafta
- Add dots argument to nafta()
- Use cores=1 in examples
- Restrict N in IORE model to values > 0
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- Rebuild static documentation
- Adapt test to new approach to two component error model
where the model is inadequate
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