| Age | Commit message (Collapse) | Author | Files | Lines | |
|---|---|---|---|---|---|
| 2022-11-17 | Complete update of online docs for v1.2.0 | Johannes Ranke | 1 | -33/+42 | |
| 2022-03-07 | Remove nlmixr interface for release of mkin 1.1.0 | Johannes Ranke | 1 | -1/+1 | |
| I am postponing my attempts to get the nlmixr interface to CRAN, given some problems with nlmixr using R-devel under Windows, see https://github.com/nlmixrdevelopment/nlmixr/issues/596 and https://github.com/r-hub/rhub/issues/512, which is fixed by the removal of nlmixr from the testsuite. For the tests to be more platform independent, the biphasic mixed effects models test dataset was defined in a way that fitting should be more robust (less ill-defined). | |||||
| 2022-03-02 | Make tests more platform independent, update docs | Johannes Ranke | 1 | -164/+113 | |
| 2021-02-15 | Improve README, introductory vignette and some other docsv1.0.3 | Johannes Ranke | 1 | -12/+12 | |
| Also bump version to 1.0.3. | |||||
| 2021-02-03 | Prepare for v1.0.0v1.0.0 | Johannes Ranke | 1 | -34/+47 | |
| - Improve authorship and copyright information - Prepare pkgdown config - Remove dependence on saemix as we need the development version which is not ready for CRAN - Temporarily remove saemix interface to check code coverage of the rest | |||||
| 2020-05-27 | Add docs generated using released version 0.9.52 | Johannes Ranke | 1 | -15/+15 | |
| 2020-05-12 | Update vignettes and docs | Johannes Ranke | 1 | -56/+53 | |
| 2019-11-01 | Fix bug in yesterdays release, add methods for BIC | Johannes Ranke | 1 | -10/+6 | |
| 2019-09-18 | Correct and rebuild docs | Johannes Ranke | 1 | -10/+22 | |
| - Reconcile docs and code for max_twa_parent - Correct links to docs in twa vignette - Static documentation rebuilt by pkgdown | |||||
| 2019-07-05 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -1/+1 | |
| 2019-06-04 | Additional algorithm "d_c", more tests, docs | Johannes Ranke | 1 | -2/+2 | |
| The new algorithm tries direct optimization of the likelihood, as well as a three step procedure. In this way, we consistently get the model with the highest likelihood for SFO, DFOP and HS for all 12 new test datasets. | |||||
| 2019-05-07 | Fix hessian calculations | Johannes Ranke | 1 | -18/+36 | |
| Static documentation rebuilt by pkgdown | |||||
| 2019-05-07 | After the OLS step, use OLS parameter estimates | Johannes Ranke | 1 | -36/+18 | |
| - Fix the respective error in the code - Static documentation rebuilt by pkgdown | |||||
| 2019-05-03 | Improve error model fitting | Johannes Ranke | 1 | -17/+17 | |
| Now we have a three stage fitting process for nonconstant error models: - Unweighted least squares - Only optimize the error model - Optimize both Static documentation rebuilt by pkgdown | |||||
| 2019-05-02 | Better initials for error model parameters | Johannes Ranke | 1 | -8/+8 | |
| - Also make it possible to specify initial values for error model parameters. - Run tests - Rebuild docs | |||||
| 2019-04-10 | Adapt tests, vignettes and examples | Johannes Ranke | 1 | -34/+36 | |
| - Write the NEWS - Static documentation rebuilt by pkgdown - Adapt mkinerrmin - Fix (hopefully all) remaining problems in mkinfit | |||||
| 2019-03-04 | Review tests and examples based on winbuilder results | Johannes Ranke | 1 | -1/+1 | |
| Static documentation rebuilt by pkgdown | |||||
| 2019-02-26 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -0/+3 | |
| 2019-02-25 | Static documentation rebuilt by current pkgdown | Johannes Ranke | 1 | -1/+1 | |
| 2019-02-21 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -1/+1 | |
| 2019-01-31 | Restore NAMESPACE | Johannes Ranke | 1 | -4/+44 | |
| which was accidentally overwritten by pkgdown -> roxygen | |||||
| 2019-01-31 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -56/+17 | |
| 2018-09-18 | Support maximum twa for HS, test, docs | Johannes Ranke | 1 | -1/+1 | |
| 2018-09-14 | Remove two vignettes from the package but not from docs | Johannes Ranke | 1 | -3/+3 | |
| - Rebuild static documentation - Adapt test to new approach to two component error model where the model is inadequate | |||||
| 2018-09-14 | Exclude more example code from CRAN checks | Johannes Ranke | 1 | -17/+45 | |
| to avoid NOTES about long execution times. Static documentation rebuilt by pkgdown with run_dont_run = TRUE | |||||
| 2018-09-14 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -1/+1 | |
| Also update test log | |||||
| 2018-07-18 | Correct references to the Rocke and Lorenzato model | Johannes Ranke | 1 | -1/+1 | |
| Rename 'sigma_rl' to 'sigma_twocomp' as the Rocke and Lorenzato model assumes lognormal distribution for large y. Rebuild static documentation. | |||||
| 2018-06-06 | Static documentation rebuilt by pkgdown 1.1.0 | Johannes Ranke | 1 | -5/+22 | |
| 2018-03-11 | Static docs rebuilt again, with current pkgdown | Johannes Ranke | 1 | -0/+6 | |
| 2018-03-09 | Another rebuild of the static docs | Johannes Ranke | 1 | -5/+0 | |
| Now with rbenchmark installed, to get results for the compiled_models vignette | |||||
| 2018-03-01 | Static documentation rebuilt using current pkgdown::build_site() | Johannes Ranke | 1 | -46/+24 | |
| 2018-02-06 | Skip some tests on CRAN, more quiet examplesv0.9.47.1 | Johannes Ranke | 1 | -206/+6 | |
| 2018-01-07 | Don't run water sediment example to reduce time needed | Johannes Ranke | 1 | -1/+3 | |
| Static documentation except articles rebuilt by pkgdown | |||||
| 2018-01-05 | Convert synthetic_data_for_UBA_2014 to mkinds | Johannes Ranke | 1 | -2/+2 | |
| Static documentation except articles rebuilt by pkgdown | |||||
| 2018-01-05 | Experimental test data from UBA 2014 expertise | Johannes Ranke | 1 | -0/+411 | |
| - Typo in synthetic data for UBA - Static documentation except articles rebuilt by pkgdown | |||||
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index : mkin | |
| Fitting kinetic models to chemical degradation data (also on github) | Johannes Ranke |
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