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Fitting kinetic models to chemical degradation data (also on github)
Johannes Ranke
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2020-07-15
Improve tests
Johannes Ranke
1
-2
/
+3
2020-05-29
Improve handling of warnings, reorganize tests
Johannes Ranke
1
-0
/
+65
2020-05-29
Warn if standardized residuals are unlikely normal
Johannes Ranke
1
-63
/
+0
2020-05-27
Improve mkinmod docs
Johannes Ranke
1
-26
/
+39
2020-05-26
Use all cores per default, confint tolerance
Johannes Ranke
5
-10
/
+31
2020-05-25
Tell travis where to find the required saemix version
Johannes Ranke
1
-6
/
+4
2020-05-25
First working version of saemix helper functions
Johannes Ranke
1
-0
/
+43
2020-05-15
Improve docs
Johannes Ranke
1
-7
/
+1
2020-05-15
Use markdown links in mkinfit documentation
Johannes Ranke
1
-24
/
+24
2020-05-14
Update version number, better example formatting
Johannes Ranke
1
-1
/
+4
2020-05-14
Add a parms method for mmkin objects
Johannes Ranke
1
-2
/
+17
2020-05-14
Test markdown link, article update due to .rmd extension
Johannes Ranke
1
-1
/
+1
2020-05-12
Another documentation update
Johannes Ranke
1
-11
/
+8
2020-05-12
Update vignettes and docs
Johannes Ranke
1
-1
/
+1
2020-05-12
Improve documentation, now using a spell checker
Johannes Ranke
7
-7
/
+7
2020-05-12
Documentation improvements, rebuild static docs
Johannes Ranke
30
-225
/
+236
2020-05-11
Add analytical solution for DFOP-SFO
Johannes Ranke
1
-1
/
+8
2020-05-11
Avoid merge() and data.frame() in cost function
Johannes Ranke
1
-8
/
+5
2020-05-09
Avoid the call to merge for analytical solutions
Johannes Ranke
4
-22
/
+22
2020-05-08
Slight performance gain by reducing default n.outtimes
Johannes Ranke
1
-2
/
+2
2020-05-08
Roxygenize, adapt tests
Johannes Ranke
1
-1
/
+10
2020-05-07
Another overhaul of analytical solutions
Johannes Ranke
7
-61
/
+86
2020-05-07
Merge parent solutions to one file
Johannes Ranke
1
-0
/
+6
2020-05-07
Static documentation rebuilt by pkgdown
Johannes Ranke
7
-48
/
+143
2020-05-06
Change implementation of analytical solutions
Johannes Ranke
3
-55
/
+63
2020-04-22
Support SFORB with formation fractions
Johannes Ranke
1
-2
/
+2
2020-04-18
Avoid assignment to .GlobalEnv for CRAN
Johannes Ranke
2
-2
/
+17
2020-04-15
Adapt endpoint() to also work for nlme.mmkin objects
Johannes Ranke
2
-2
/
+15
2020-04-15
Include random effects in starting parameters
Johannes Ranke
4
-73
/
+86
2020-04-15
A plot method for nlme.mmkin fits
Johannes Ranke
3
-4
/
+76
2020-04-14
Add a nlme method for mmkin row objects
Johannes Ranke
2
-9
/
+78
2020-04-14
Keep order of datasets in nlme_data, add a plot
Johannes Ranke
1
-1
/
+7
2020-04-10
Improve nlme function docs
Johannes Ranke
1
-9
/
+9
2020-04-07
Add some tests for the nlme convenience functions
Johannes Ranke
1
-2
/
+3
2020-04-04
Add three functions to facilitate the use of nlme
Johannes Ranke
3
-89
/
+140
2020-04-03
Merge branch 'master' into mxkin
Johannes Ranke
4
-20
/
+44
2020-04-03
Compiled models article, reduce distractions
Johannes Ranke
2
-1
/
+6
2020-03-31
Use inline documentation for R6 class mkinds
Johannes Ranke
2
-19
/
+38
2020-03-30
Don't check for gcc on the path in mkinmod
Johannes Ranke
15
-82
/
+246
2020-03-30
Fixed example code
Johannes Ranke
1
-8
/
+20
2020-03-30
First nlme fits for models with a metabolite
Johannes Ranke
16
-82
/
+318
2019-12-16
Argument ymax for plot.mmkin
Johannes Ranke
1
-1
/
+3
2019-12-09
Consistently use "two-component error model"
Johannes Ranke
1
-1
/
+1
2019-11-13
Improve formatting using markdown
Johannes Ranke
1
-6
/
+6
2019-11-13
Calculate Akaike weights
Johannes Ranke
1
-0
/
+47
2019-11-13
Likelihood ratio test for mmkin columns with two fits
Johannes Ranke
1
-1
/
+5
2019-11-09
Add a lack-of-fit test
Johannes Ranke
1
-0
/
+81
2019-11-05
Fix standardized residual plots in 'plot_res'
Johannes Ranke
1
-3
/
+4
2019-11-04
Scaled residual plots
Johannes Ranke
2
-9
/
+22
2019-11-04
Include fixed parameters in model names in lrtest
Johannes Ranke
2
-6
/
+10
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