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    <h1>Print mkinmod objects</h1>
    
    <div class="hidden name"><code>print.mkinmod.Rd</code></div>
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    <div class="ref-description">
    
    <p>Print mkinmod objects in a way that the user finds his way to get to its components.</p>
    
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    <pre class="usage"><span class='co'># S3 method for mkinmod</span>
<span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/print'>print</a></span>(<span class='no'>x</span>, <span class='no'>...</span>)</pre>
    
    <h2 class="hasAnchor" id="arguments"><a class="anchor" href="#arguments"></a>Arguments</h2>
    <table class="ref-arguments">
    <colgroup><col class="name" /><col class="desc" /></colgroup>
    <tr>
      <th>x</th>
      <td><p>An <code><a href='mkinmod.html'>mkinmod</a></code> object.</p></td>
    </tr>
    <tr>
      <th>&#8230;</th>
      <td><p>Not used.</p></td>
    </tr>
    </table>
    

    <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
    <pre class="examples"><div class='input'>  <span class='no'>m_synth_SFO_lin</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinmod.html'>mkinmod</a></span>(<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/list'>list</a></span>(<span class='kw'>type</span> <span class='kw'>=</span> <span class='st'>"SFO"</span>, <span class='kw'>to</span> <span class='kw'>=</span> <span class='st'>"M1"</span>),
                             <span class='kw'>M1</span> <span class='kw'>=</span> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/list'>list</a></span>(<span class='kw'>type</span> <span class='kw'>=</span> <span class='st'>"SFO"</span>, <span class='kw'>to</span> <span class='kw'>=</span> <span class='st'>"M2"</span>),
                             <span class='kw'>M2</span> <span class='kw'>=</span> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/list'>list</a></span>(<span class='kw'>type</span> <span class='kw'>=</span> <span class='st'>"SFO"</span>), <span class='kw'>use_of_ff</span> <span class='kw'>=</span> <span class='st'>"max"</span>)</div><div class='output co'>#&gt; <span class='message'>Successfully compiled differential equation model from auto-generated C code.</span></div><div class='input'>
  <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/print'>print</a></span>(<span class='no'>m_synth_SFO_lin</span>)</div><div class='output co'>#&gt; &lt;mkinmod&gt; model generated with
#&gt; Use of formation fractions $use_of_ff: max 
#&gt; Specification $spec:
#&gt; $parent
#&gt; $type: SFO; $to: M1; $sink: TRUE
#&gt; $M1
#&gt; $type: SFO; $to: M2; $sink: TRUE
#&gt; $M2
#&gt; $type: SFO; $sink: TRUE
#&gt; Coefficient matrix $coefmat available
#&gt; Compiled model $cf available
#&gt; Differential equations:
#&gt; d_parent/dt = - k_parent * parent
#&gt; d_M1/dt = + f_parent_to_M1 * k_parent * parent - k_M1 * M1
#&gt; d_M2/dt = + f_M1_to_M2 * k_M1 * M1 - k_M2 * M2</div></pre>
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      <li><a href="#arguments">Arguments</a></li>
            
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