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# Copyright (C) 2019 Johannes Ranke
# Contact: jranke@uni-bremen.de
# This file is part of the R package mkin
# mkin is free software: you can redistribute it and/or modify it under the
# terms of the GNU General Public License as published by the Free Software
# Foundation, either version 3 of the License, or (at your option) any later
# version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
# You should have received a copy of the GNU General Public License along with
# this program. If not, see <http://www.gnu.org/licenses/>
context("mkinmod model generation and printing")
test_that("mkinmod stops to prevent and/or explain user errors", {
expect_error(mkinmod(compound_x = mkinsub("SFO", to = "compound_x_y"),
compound_x_y = mkinsub("SFO")),
"variable names can not contain each other")
expect_error(mkinmod(compound_to_x = mkinsub("SFO")),
"can not contain _to_")
expect_error(mkinmod(sink = mkinsub("SFO")),
"Naming")
expect_error(mkinmod(parent = mkinsub("SFO"), use_of_ff = "foo"))
expect_error(mkinmod(parent = mkinsub("foo")))
expect_error(mkinmod(parent = mkinsub("SFO", "m1"),
m1 = mkinsub("FOMC")),
"only implemented for the first compartment")
expect_error(mkinmod(parent = mkinsub("IORE", "m1"),
m1 = mkinsub("SFO"), use_of_ff = "min"),
"only supported with formation fractions")
expect_error(mkinmod(parent = mkinsub("SFORB", "m1"),
m1 = mkinsub("SFO"), use_of_ff = "max"),
"not supported")
})
test_that("Printing mkinmod models is reproducible", {
m_test <- mkinmod(parent = mkinsub("SFO", "m1"),
m1 = mkinsub("SFO"),
quiet = TRUE)
m_test$cf <- NULL # Remove to make test robust against missing gcc
expect_known_output(print(m_test),
file = "SFO_SFO_printed.txt")
})
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