diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2017-05-16 18:57:16 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2017-05-16 18:57:16 +0200 |
| commit | d60bb9c0b52c8e0452bfbe507e60d5f651589cc8 (patch) | |
| tree | c4f81fc731fd4db34e16928ccf274541cf738b5b | |
| parent | 14fa47b1ea1651fc2cb7bbf0086741a8004d35ee (diff) | |
Update static documentation
| -rw-r--r-- | docs/reference/PEC_sw_focus.html | 57 | ||||
| -rw-r--r-- | docs/reference/PELMO_runs.html | 2 |
2 files changed, 32 insertions, 27 deletions
diff --git a/docs/reference/PEC_sw_focus.html b/docs/reference/PEC_sw_focus.html index c5cbfe7..28aa1bd 100644 --- a/docs/reference/PEC_sw_focus.html +++ b/docs/reference/PEC_sw_focus.html @@ -87,7 +87,8 @@ this implementation.</p> <colgroup><col class="name" /><col class="desc" /></colgroup> <tr> <th>parent</th> - <td><p>A list containing substance specific parameters</p></td> + <td><p>A list containing substance specific parameters, e.g. +conveniently generated by <code><a href='chent_focus_sw.html'>chent_focus_sw</a></code>.</p></td> </tr> <tr> <th>rate</th> @@ -104,14 +105,15 @@ applications are given explicitly</p></td> </tr> <tr> <th>met</th> - <td><p>A list containing metabolite specific parameters. If not NULL, + <td><p>A list containing metabolite specific parameters. e.g. +conveniently generated by <code><a href='chent_focus_sw.html'>chent_focus_sw</a></code>. If not NULL, the PEC is calculated for this compound, not the parent.</p></td> </tr> <tr> <th>f_drift</th> <td><p>The fraction of the application rate reaching the waterbody via drift. If NA, this is derived from the scenario name and the number -of applications via the drift data defined by the +of applications via the drift data defined by the <code><a href='FOCUS_Step_12_scenarios.html'>FOCUS_Step_12_scenarios</a></code></p></td> </tr> <tr> @@ -131,8 +133,11 @@ names given in <code><a href='FOCUS_Step_12_scenarios.html'>FOCUS_Step_12_scenar <p>The formulas for input to the waterbody via runoff/drainage of the parent and subsequent formation of the metabolite in water is not - documented in the model description coming with the calculator</p> -<p>Step 2 is not implemented</p> + documented in the model description coming with the calculator. As one would + expecte, this additional input appears to be (as we get the same results) + calculated by multiplying the application rate with the molar weight + correction and the formation fraction in water/sediment systems.</p> +<p>Step 2 is not implemented.</p> <h2 class="hasAnchor" id="references"><a class="anchor" href="#references"></a>References</h2> @@ -173,18 +178,18 @@ names given in <code><a href='FOCUS_Step_12_scenarios.html'>FOCUS_Step_12_scenar #> #> $PEC #> type -#> Time PECsw TWAECsw PECsed TWAECsed -#> 0 6.850566e+02 NA 2.362075e+03 NA -#> 1 6.103161e+02 647.6864 2.104370e+03 2233.223 -#> 2 5.437298e+02 NA 1.874780e+03 NA -#> 4 4.315586e+02 NA 1.488014e+03 NA -#> 7 3.051580e+02 NA 1.052185e+03 NA -#> 14 1.359325e+02 NA 4.686951e+02 NA -#> 21 6.055102e+01 NA 2.087799e+02 NA -#> 28 2.697241e+01 NA 9.300089e+01 NA -#> 42 5.352005e+00 NA 1.845371e+01 NA -#> 50 2.123945e+00 NA 7.323361e+00 NA -#> 100 6.585062e-03 NA 2.270529e-02 NA +#> Time PECsw TWAECsw PECsed TWAECsed +#> 0 6.850566e+02 NA 2.362075e+03 NA +#> 1 6.103161e+02 647.68635 2.104370e+03 2233.2225 +#> 2 5.437298e+02 612.03420 1.874780e+03 2110.2939 +#> 4 4.315586e+02 548.76030 1.488014e+03 1892.1255 +#> 7 3.051580e+02 469.88375 1.052185e+03 1620.1592 +#> 14 1.359325e+02 339.57370 4.686951e+02 1170.8501 +#> 21 6.055102e+01 257.45458 2.087799e+02 887.7034 +#> 28 2.697241e+01 203.47173 9.300089e+01 701.5705 +#> 42 5.352005e+00 140.10377 1.845371e+01 483.0778 +#> 50 2.123945e+00 118.24602 7.323361e+00 407.7123 +#> 100 6.585062e-03 59.30629 2.270529e-02 204.4881 #> #> $PEC_sw_max #> [1] 685.0566 @@ -224,15 +229,15 @@ names given in <code><a href='FOCUS_Step_12_scenarios.html'>FOCUS_Step_12_scenar #> Time PECsw TWAECsw PECsed TWAECsed #> 0 62.50000 NA 31.25000 NA #> 1 62.06828 62.28414 31.03414 31.14207 -#> 2 61.63954 NA 30.81977 NA -#> 4 60.79093 NA 30.39547 NA -#> 7 59.53987 NA 29.76994 NA -#> 14 56.71995 NA 28.35997 NA -#> 21 54.03358 NA 27.01679 NA -#> 28 51.47444 NA 25.73722 NA -#> 42 46.71404 NA 23.35702 NA -#> 50 44.19417 NA 22.09709 NA -#> 100 31.25000 NA 15.62500 NA +#> 2 61.63954 62.06890 30.81977 31.03445 +#> 4 60.79093 61.64158 30.39547 30.82079 +#> 7 59.53987 61.00800 29.76994 30.50400 +#> 14 56.71995 59.56326 28.35997 29.78163 +#> 21 54.03358 58.16414 27.01679 29.08207 +#> 28 51.47444 56.80902 25.73722 28.40451 +#> 42 46.71404 54.22460 23.35702 27.11230 +#> 50 44.19417 52.81945 22.09709 26.40973 +#> 100 31.25000 45.08422 15.62500 22.54211 #> #> $PEC_sw_max #> [1] 62.5 diff --git a/docs/reference/PELMO_runs.html b/docs/reference/PELMO_runs.html index 7fcbba8..ed7975e 100644 --- a/docs/reference/PELMO_runs.html +++ b/docs/reference/PELMO_runs.html @@ -144,7 +144,7 @@ the period.plm file generated by the FOCUS PELMO GUI.</p> <h2 class="hasAnchor" id="references"><a class="anchor" href="#references"></a>References</h2> - <p>PELMO.installeR <a href = 'https://jranke.github.io/PELMO.installeR'>https://jranke.github.io/PELMO.installeR</a></p> + <p>PELMO.installeR <a href = 'https://pkgdown.jrwb.de/PELMO.installeR'>https://pkgdown.jrwb.de/PELMO.installeR</a></p> <p>Wine <a href = 'https://winehq.org'>https://winehq.org</a></p> <p>PELMO test results <a href = 'http://esdac.jrc.ec.europa.eu/public_path/projects_data/focus/gw/models/pelmo/test-results/test_results_FOCUS_PELMO_5_5_3.doc'>http://esdac.jrc.ec.europa.eu/public_path/projects_data/focus/gw/models/pelmo/test-results/test_results_FOCUS_PELMO_5_5_3.doc</a></p> |