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| author | Johannes Ranke <jranke@uni-bremen.de> | 2019-09-27 10:00:15 +0200 | 
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2019-09-27 11:08:53 +0200 | 
| commit | 435e07a6f7fd2599d783fd306ee6d9e08acc0c6b (patch) | |
| tree | bd47fa18a307349eabf4ecfff7ea8da81f5bb654 /docs/reference/EFSA_GW_interception_2014.html | |
| parent | 803fe13e505960fddccdbd4dcb524715f5eb068d (diff) | |
Fix for UK drainage, some EFSA interception and washoff
- PEC_sw_drainage_UK() gave results that were a little bit too high
for the substances with the highest Koc (>4000), as I used 0.01% instead
of 0.008% for them. This must have come from an old vesion of the UK
data requirements handbook, at least I do not have another explanation
- Add EFSA interception (from 2014 DegT50 guidance) and tier 1
crop wash-off factors (from 2017 PEC soil guidance) for some major
arable crops
- Update docs
Diffstat (limited to 'docs/reference/EFSA_GW_interception_2014.html')
| -rw-r--r-- | docs/reference/EFSA_GW_interception_2014.html | 198 | 
1 files changed, 198 insertions, 0 deletions
diff --git a/docs/reference/EFSA_GW_interception_2014.html b/docs/reference/EFSA_GW_interception_2014.html new file mode 100644 index 0000000..c8d08fd --- /dev/null +++ b/docs/reference/EFSA_GW_interception_2014.html @@ -0,0 +1,198 @@ +<!-- Generated by pkgdown: do not edit by hand --> +<!DOCTYPE html> +<html lang="en"> +  <head> +  <meta charset="utf-8"> +<meta http-equiv="X-UA-Compatible" content="IE=edge"> +<meta name="viewport" content="width=device-width, initial-scale=1.0"> + +<title>Subset of EFSA crop interception default values for groundwater modelling — EFSA_GW_interception_2014 • pfm</title> + +<!-- jquery --> +<script src="https://cdnjs.cloudflare.com/ajax/libs/jquery/3.3.1/jquery.min.js" integrity="sha256-FgpCb/KJQlLNfOu91ta32o/NMZxltwRo8QtmkMRdAu8=" crossorigin="anonymous"></script> +<!-- Bootstrap --> + +<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/3.3.7/css/bootstrap.min.css" 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class="ref-description"> +     +    <p>Subset of EFSA crop interception default values for groundwater modelling</p> +     +    </div> + +         +    <h2 class="hasAnchor" id="format"><a class="anchor" href="#format"></a>Format</h2> + +    <p>A matrix containing interception values, currently only for some selected crops</p> +     +    <h2 class="hasAnchor" id="source"><a class="anchor" href="#source"></a>Source</h2> + +    <p>European Food Safety Authority (2014) EFSA Guidance Document for +evaluating laboratory and field dissipation studies to obtain DegT50 values +of active substances of plant protection products and transformation +products of these active substances in soil. <em>EFSA Journal</em> +<b>12</b>(5):3662, 37 pp., doi:10.2903/j.efsa.2014.3662</p> +     + +    <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2> +    <pre class="examples"><div class='input'><span class='kw'>if</span> (<span class='fl'>FALSE</span>) { +  <span class='co'># This is the code that was used to define the data</span> +  <span class='no'>bbch</span> <span class='kw'><-</span> <span class='fu'><a href='https://rdrr.io/r/base/paste.html'>paste0</a></span>(<span class='fl'>0</span>:<span class='fl'>9</span>, <span class='st'>"x"</span>) +  <span class='no'>crops</span> <span class='kw'><-</span> <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>( +    <span class='st'>"Beans (field + vegetable)"</span>, +    <span class='st'>"Peas"</span>, +    <span class='st'>"Summer oilseed rape"</span>, <span class='st'>"Winter oilseed rape"</span>, +    <span class='st'>"Tomatoes"</span>, +    <span class='st'>"Spring cereals"</span>, <span class='st'>"Winter cereals"</span>) +  <span class='no'>EFSA_GW_interception_2014</span> <span class='kw'><-</span> <span class='fu'><a href='https://rdrr.io/r/base/matrix.html'>matrix</a></span>(<span class='fl'>NA</span>, <span class='fu'><a href='https://rdrr.io/r/base/length.html'>length</a></span>(<span class='no'>crops</span>), <span class='fu'><a href='https://rdrr.io/r/base/length.html'>length</a></span>(<span class='no'>bbch</span>), +    <span class='kw'>dimnames</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/list.html'>list</a></span>(<span class='kw'>Crop</span> <span class='kw'>=</span> <span class='no'>crops</span>, <span class='kw'>BBCH</span> <span class='kw'>=</span> <span class='no'>bbch</span>)) +  <span class='no'>EFSA_GW_interception_2014</span>[<span class='st'>"Beans (field + vegetable)"</span>, ] <span class='kw'><-</span> +    <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='fl'>0</span>, <span class='fl'>0.25</span>, <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.4</span>, <span class='fl'>2</span>), <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.7</span>, <span class='fl'>5</span>), <span class='fl'>0.8</span>) +  <span class='no'>EFSA_GW_interception_2014</span>[<span class='st'>"Peas"</span>, ] <span class='kw'><-</span> +    <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='fl'>0</span>, <span class='fl'>0.35</span>, <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.55</span>, <span class='fl'>2</span>), <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.85</span>, <span class='fl'>5</span>), <span class='fl'>0.85</span>) +  <span class='no'>EFSA_GW_interception_2014</span>[<span class='st'>"Summer oilseed rape"</span>, ] <span class='kw'><-</span> +    <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='fl'>0</span>, <span class='fl'>0.4</span>, <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.8</span>, <span class='fl'>2</span>), <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.8</span>, <span class='fl'>5</span>), <span class='fl'>0.9</span>) +  <span class='no'>EFSA_GW_interception_2014</span>[<span class='st'>"Winter oilseed rape"</span>, ] <span class='kw'><-</span> +    <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='fl'>0</span>, <span class='fl'>0.4</span>, <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.8</span>, <span class='fl'>2</span>), <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.8</span>, <span class='fl'>5</span>), <span class='fl'>0.9</span>) +  <span class='no'>EFSA_GW_interception_2014</span>[<span class='st'>"Tomatoes"</span>, ] <span class='kw'><-</span> +    <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='fl'>0</span>, <span class='fl'>0.5</span>, <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.7</span>, <span class='fl'>2</span>), <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.8</span>, <span class='fl'>5</span>), <span class='fl'>0.5</span>) +  <span class='no'>EFSA_GW_interception_2014</span>[<span class='st'>"Spring cereals"</span>, ] <span class='kw'><-</span> +    <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='fl'>0</span>, <span class='fl'>0</span>, <span class='fl'>0.2</span>, <span class='fl'>0.8</span>, <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.9</span>, <span class='fl'>3</span>), <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.8</span>, <span class='fl'>2</span>), <span class='fl'>0.8</span>) +  <span class='no'>EFSA_GW_interception_2014</span>[<span class='st'>"Winter cereals"</span>, ] <span class='kw'><-</span> +    <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='fl'>0</span>, <span class='fl'>0</span>, <span class='fl'>0.2</span>, <span class='fl'>0.8</span>, <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.9</span>, <span class='fl'>3</span>), <span class='fu'><a href='https://rdrr.io/r/base/rep.html'>rep</a></span>(<span class='fl'>0.8</span>, <span class='fl'>2</span>), <span class='fl'>0.8</span>) +  <span class='fu'><a href='https://rdrr.io/r/base/save.html'>save</a></span>(<span class='no'>EFSA_GW_interception_2014</span>, +    <span class='kw'>file</span> <span class='kw'>=</span> <span class='st'>"../data/EFSA_GW_interception_2014.RData"</span>) +} +<span class='no'>EFSA_GW_interception_2014</span></div><div class='output co'>#>                            BBCH +#> Crop                        0x   1x   2x   3x   4x   5x   6x   7x   8x   9x +#>   Beans (field + vegetable)  0 0.25 0.40 0.40 0.70 0.70 0.70 0.70 0.70 0.80 +#>   Peas                       0 0.35 0.55 0.55 0.85 0.85 0.85 0.85 0.85 0.85 +#>   Summer oilseed rape        0 0.40 0.80 0.80 0.80 0.80 0.80 0.80 0.80 0.90 +#>   Winter oilseed rape        0 0.40 0.80 0.80 0.80 0.80 0.80 0.80 0.80 0.90 +#>   Tomatoes                   0 0.50 0.70 0.70 0.80 0.80 0.80 0.80 0.80 0.50 +#>   Spring cereals             0 0.00 0.20 0.80 0.90 0.90 0.90 0.80 0.80 0.80 +#>   Winter cereals             0 0.00 0.20 0.80 0.90 0.90 0.90 0.80 0.80 0.80</div></pre> +  </div> +  <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> +    <h2>Contents</h2> +    <ul class="nav nav-pills nav-stacked"> +       +      <li><a href="#format">Format</a></li> + +      <li><a href="#source">Source</a></li> +       +      <li><a href="#examples">Examples</a></li> +    </ul> + +  </div> +</div> + + +      <footer> +      <div class="copyright"> +  <p>Developed by Johannes Ranke.</p> +</div> + +<div class="pkgdown"> +  <p>Site built with <a href="https://pkgdown.r-lib.org/">pkgdown</a> 1.4.1.</p> +</div> + +      </footer> +   </div> + +   + + +  </body> +</html> + +  | 
