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| author | Ranke Johannes <johannes.ranke@agroscope.admin.ch> | 2024-01-31 13:16:17 +0100 |
|---|---|---|
| committer | Ranke Johannes <johannes.ranke@agroscope.admin.ch> | 2024-01-31 13:27:50 +0100 |
| commit | aed160d7f0eaf5865e2bd9bf6c4b1c9d7b13d911 (patch) | |
| tree | 7ca136834857c12449f50a1e086a589cc9b79e2e /docs/reference/PEC_sw_exposit_runoff.html | |
| parent | 64f629efbe666bae56f48a309adf33d1eb09c358 (diff) | |
Reorganise data generation
- Use inst/data_generation for R code generating data as in some of my other packages
- data/*.RData files were checked using https://github.com/jranke/dotfiles/blob/main/bin/rda_diff
contents were not changed
- Remove ChangeLog, the history is in the git logs
- Update docs and some links contained therein
- use \doi{} markup
- Move logs to log directory
Diffstat (limited to 'docs/reference/PEC_sw_exposit_runoff.html')
| -rw-r--r-- | docs/reference/PEC_sw_exposit_runoff.html | 341 |
1 files changed, 140 insertions, 201 deletions
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- - - </head> +<![endif]--></head><body data-spy="scroll" data-target="#toc"> + - <body> <div class="container template-reference-topic"> - <header> - <div class="navbar navbar-default navbar-fixed-top" role="navigation"> + <header><div class="navbar navbar-default navbar-fixed-top" role="navigation"> <div class="container"> <div class="navbar-header"> <button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar" aria-expanded="false"> @@ -70,35 +18,21 @@ in the worksheet "Konzept Runoff"." /> </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">pfm</a> - <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.5.7</span> + <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="">0.6.1</span> </span> </div> <div id="navbar" class="navbar-collapse collapse"> - <ul class="nav navbar-nav"> - <li> - <a href="../index.html"> - <span class="fas fa fas fa-home fa-lg"></span> - - </a> -</li> -<li> + <ul class="nav navbar-nav"><li> <a href="../reference/index.html">Reference</a> </li> - </ul> - <ul class="nav navbar-nav navbar-right"> - - </ul> - - </div><!--/.nav-collapse --> + </ul><ul class="nav navbar-nav navbar-right"></ul></div><!--/.nav-collapse --> </div><!--/.container --> </div><!--/.navbar --> - </header> - -<div class="row"> + </header><div class="row"> <div class="col-md-9 contents"> <div class="page-header"> <h1>Calculate PEC surface water due to runoff and erosion as in Exposit 3</h1> @@ -111,152 +45,157 @@ in the worksheet "Konzept Runoff"." /> in the worksheet "Konzept Runoff".</p> </div> - <pre class="usage"><span class='fu'>PEC_sw_exposit_runoff</span>( - <span class='no'>rate</span>, - <span class='kw'>interception</span> <span class='kw'>=</span> <span class='fl'>0</span>, - <span class='no'>Koc</span>, - <span class='kw'>DT50</span> <span class='kw'>=</span> <span class='fl'>Inf</span>, - <span class='kw'>t_runoff</span> <span class='kw'>=</span> <span class='fl'>3</span>, - <span class='kw'>exposit_reduction_version</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='st'>"3.02"</span>, <span class='st'>"3.01a"</span>, <span class='st'>"3.01a2"</span>, <span class='st'>"2.0"</span>), - <span class='kw'>V_ditch</span> <span class='kw'>=</span> <span class='fl'>30</span>, - <span class='kw'>V_event</span> <span class='kw'>=</span> <span class='fl'>100</span>, - <span class='kw'>dilution</span> <span class='kw'>=</span> <span class='fl'>2</span> -)</pre> - - <h2 class="hasAnchor" id="arguments"><a class="anchor" href="#arguments"></a>Arguments</h2> - <table class="ref-arguments"> - <colgroup><col class="name" /><col class="desc" /></colgroup> - <tr> - <th>rate</th> - <td><p>The application rate in g/ha</p></td> - </tr> - <tr> - <th>interception</th> - <td><p>The fraction intercepted by the crop</p></td> - </tr> - <tr> - <th>Koc</th> - <td><p>The sorption coefficient to soil organic carbon</p></td> - </tr> - <tr> - <th>DT50</th> - <td><p>The soil half-life in days</p></td> - </tr> - <tr> - <th>t_runoff</th> - <td><p>The time between application and the runoff event, where degradation occurs, in days</p></td> - </tr> - <tr> - <th>exposit_reduction_version</th> - <td><p>The version of the reduction factors to be used. "3.02" is the current + <div id="ref-usage"> + <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">PEC_sw_exposit_runoff</span><span class="op">(</span></span> +<span> <span class="va">rate</span>,</span> +<span> interception <span class="op">=</span> <span class="fl">0</span>,</span> +<span> <span class="va">Koc</span>,</span> +<span> DT50 <span class="op">=</span> <span class="cn">Inf</span>,</span> +<span> t_runoff <span class="op">=</span> <span class="fl">3</span>,</span> +<span> exposit_reduction_version <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"3.02"</span>, <span class="st">"3.01a"</span>, <span class="st">"3.01a2"</span>, <span class="st">"2.0"</span><span class="op">)</span>,</span> +<span> V_ditch <span class="op">=</span> <span class="fl">30</span>,</span> +<span> V_event <span class="op">=</span> <span class="fl">100</span>,</span> +<span> dilution <span class="op">=</span> <span class="fl">2</span></span> +<span><span class="op">)</span></span></code></pre></div> + </div> + + <div id="source"> + <h2>Source</h2> + <p>Excel 3.02 spreadsheet available from + <a href="https://www.bvl.bund.de/SharedDocs/Downloads/04_Pflanzenschutzmittel/zul_umwelt_exposit.html" class="external-link">https://www.bvl.bund.de/SharedDocs/Downloads/04_Pflanzenschutzmittel/zul_umwelt_exposit.html</a></p> + </div> + <div id="arguments"> + <h2>Arguments</h2> + <dl><dt>rate</dt> +<dd><p>The application rate in g/ha</p></dd> + + +<dt>interception</dt> +<dd><p>The fraction intercepted by the crop</p></dd> + + +<dt>Koc</dt> +<dd><p>The sorption coefficient to soil organic carbon</p></dd> + + +<dt>DT50</dt> +<dd><p>The soil half-life in days</p></dd> + + +<dt>t_runoff</dt> +<dd><p>The time between application and the runoff event, where degradation occurs, in days</p></dd> + + +<dt>exposit_reduction_version</dt> +<dd><p>The version of the reduction factors to be used. "3.02" is the current version used in Germany, "3.01a" is the version with additional percentages for 3 m and 6 m buffer zones used in Switzerland. "3.01a2" is a version introduced for consistency with previous calculations performed for a 3 m buffer zone in Switzerland, with the same reduction being applied to the dissolved -and the bound fraction.</p></td> - </tr> - <tr> - <th>V_ditch</th> - <td><p>The volume of the ditch is assumed to be 1 m * 100 m * 30 cm = 30 m3</p></td> - </tr> - <tr> - <th>V_event</th> - <td><p>The unreduced runoff volume, equivalent to 10 mm precipitation on 1 ha</p></td> - </tr> - <tr> - <th>dilution</th> - <td><p>The dilution factor</p></td> - </tr> - </table> - - <h2 class="hasAnchor" id="source"><a class="anchor" href="#source"></a>Source</h2> +and the bound fraction.</p></dd> - <p>Excel 3.02 spreadsheet available from - <a href='https://www.bvl.bund.de/DE/04_Pflanzenschutzmittel/03_Antragsteller/04_Zulassungsverfahren/07_Naturhaushalt/psm_naturhaush_node.html#doc1400590bodyText3'>https://www.bvl.bund.de/DE/04_Pflanzenschutzmittel/03_Antragsteller/04_Zulassungsverfahren/07_Naturhaushalt/psm_naturhaush_node.html#doc1400590bodyText3</a></p> - <h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2> - <p>A list containing the following components</p><dl class='dl-horizontal'> - <dt>perc_runoff</dt><dd><p>The runoff percentages for dissolved and bound substance</p></dd> - <dt>runoff</dt><dd><p>A matrix containing dissolved and bound input for the different distances</p></dd> - <dt>PEC_sw_runoff</dt><dd><p>A matrix containing PEC values for dissolved and bound substance +<dt>V_ditch</dt> +<dd><p>The volume of the ditch is assumed to be 1 m * 100 m * 30 cm = 30 m3</p></dd> + + +<dt>V_event</dt> +<dd><p>The unreduced runoff volume, equivalent to 10 mm precipitation on 1 ha</p></dd> + + +<dt>dilution</dt> +<dd><p>The dilution factor</p></dd> + +</dl></div> + <div id="value"> + <h2>Value</h2> + + +<p>A list containing the following components</p> +<p></p> +<dl><dt>perc_runoff</dt> +<dd><p>The runoff percentages for dissolved and bound substance</p></dd> + + <dt>runoff</dt> +<dd><p>A matrix containing dissolved and bound input for the different distances</p></dd> + + <dt>PEC_sw_runoff</dt> +<dd><p>A matrix containing PEC values for dissolved and bound substance for the different distances. If the rate was given in g/ha, the PECsw are in microg/L.</p></dd> + -</dl> - - <h2 class="hasAnchor" id="see-also"><a class="anchor" href="#see-also"></a>See also</h2> - - <div class='dont-index'><p><code><a href='perc_runoff_exposit.html'>perc_runoff_exposit</a></code> for runoff loss percentages and <code><a href='perc_runoff_reduction_exposit.html'>perc_runoff_reduction_exposit</a></code> for runoff reduction percentages used</p></div> - - <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2> - <pre class="examples"><div class='input'> <span class='fu'>PEC_sw_exposit_runoff</span>(<span class='fl'>500</span>, <span class='kw'>Koc</span> <span class='kw'>=</span> <span class='fl'>150</span>)</div><div class='output co'>#> $perc_runoff -#> dissolved bound -#> 0.248 0.001 -#> -#> $runoff -#> dissolved bound total -#> No buffer 1.240 0.00500 1.24500 -#> 5 m 0.744 0.00300 0.74700 -#> 10 m 0.496 0.00075 0.49675 -#> 20 m 0.248 0.00025 0.24825 -#> -#> $PEC_sw_runoff -#> dissolved bound total -#> No buffer 4.769231 0.019230769 4.788462 -#> 5 m 4.133333 0.016666667 4.150000 -#> 10 m 3.542857 0.005357143 3.548214 -#> 20 m 2.480000 0.002500000 2.482500 -#> </div><div class='input'> <span class='fu'>PEC_sw_exposit_runoff</span>(<span class='fl'>600</span>, <span class='kw'>Koc</span> <span class='kw'>=</span> <span class='fl'>10000</span>, <span class='kw'>DT50</span> <span class='kw'>=</span> <span class='fl'>195</span>, <span class='kw'>exposit</span> <span class='kw'>=</span> <span class='st'>"3.01a"</span>)</div><div class='output co'>#> $perc_runoff -#> dissolved bound -#> 0.037 0.159 -#> -#> $runoff -#> dissolved bound total -#> No buffer 0.21964521 0.94388078 1.16352600 -#> 3 m 0.16473391 0.66071655 0.82545046 -#> 5 m 0.13178713 0.56632847 0.69811560 -#> 6 m 0.12080487 0.42474635 0.54555122 -#> 10 m 0.08785809 0.14158212 0.22944020 -#> 20 m 0.04392904 0.04719404 0.09112308 -#> -#> $PEC_sw_runoff -#> dissolved bound total -#> No buffer 0.8447893 3.6303107 4.4751000 -#> 3 m 0.7844472 3.1462693 3.9307165 -#> 5 m 0.7321507 3.1462693 3.8784200 -#> 6 m 0.7106169 2.4985080 3.2091248 -#> 10 m 0.6275578 1.0113008 1.6388586 -#> 20 m 0.4392904 0.4719404 0.9112308 -#> </div></pre> - </div> - <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> - <h2>Contents</h2> - <ul class="nav nav-pills nav-stacked"> - <li><a href="#arguments">Arguments</a></li> - <li><a href="#source">Source</a></li> - <li><a href="#value">Value</a></li> - <li><a href="#see-also">See also</a></li> - <li><a href="#examples">Examples</a></li> - </ul> +</dl></div> + <div id="see-also"> + <h2>See also</h2> + <div class="dont-index"><p><code><a href="perc_runoff_exposit.html">perc_runoff_exposit</a></code> for runoff loss percentages and <code><a href="perc_runoff_reduction_exposit.html">perc_runoff_reduction_exposit</a></code> for runoff reduction percentages used</p></div> + </div> + <div id="ref-examples"> + <h2>Examples</h2> + <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span> <span class="fu">PEC_sw_exposit_runoff</span><span class="op">(</span><span class="fl">500</span>, Koc <span class="op">=</span> <span class="fl">150</span><span class="op">)</span></span></span> +<span class="r-out co"><span class="r-pr">#></span> $perc_runoff</span> +<span class="r-out co"><span class="r-pr">#></span> dissolved bound </span> +<span class="r-out co"><span class="r-pr">#></span> 0.248 0.001 </span> +<span class="r-out co"><span class="r-pr">#></span> </span> +<span class="r-out co"><span class="r-pr">#></span> $runoff</span> +<span class="r-out co"><span class="r-pr">#></span> dissolved bound total</span> +<span class="r-out co"><span class="r-pr">#></span> No buffer 1.240 0.00500 1.24500</span> +<span class="r-out co"><span class="r-pr">#></span> 5 m 0.744 0.00300 0.74700</span> +<span class="r-out co"><span class="r-pr">#></span> 10 m 0.496 0.00075 0.49675</span> +<span class="r-out co"><span class="r-pr">#></span> 20 m 0.248 0.00025 0.24825</span> +<span class="r-out co"><span class="r-pr">#></span> </span> +<span class="r-out co"><span class="r-pr">#></span> $PEC_sw_runoff</span> +<span class="r-out co"><span class="r-pr">#></span> dissolved bound total</span> +<span class="r-out co"><span class="r-pr">#></span> No buffer 4.769231 0.019230769 4.788462</span> +<span class="r-out co"><span class="r-pr">#></span> 5 m 4.133333 0.016666667 4.150000</span> +<span class="r-out co"><span class="r-pr">#></span> 10 m 3.542857 0.005357143 3.548214</span> +<span class="r-out co"><span class="r-pr">#></span> 20 m 2.480000 0.002500000 2.482500</span> +<span class="r-out co"><span class="r-pr">#></span> </span> +<span class="r-in"><span> <span class="fu">PEC_sw_exposit_runoff</span><span class="op">(</span><span class="fl">600</span>, Koc <span class="op">=</span> <span class="fl">10000</span>, DT50 <span class="op">=</span> <span class="fl">195</span>, exposit <span class="op">=</span> <span class="st">"3.01a"</span><span class="op">)</span></span></span> +<span class="r-out co"><span class="r-pr">#></span> $perc_runoff</span> +<span class="r-out co"><span class="r-pr">#></span> dissolved bound </span> +<span class="r-out co"><span class="r-pr">#></span> 0.037 0.159 </span> +<span class="r-out co"><span class="r-pr">#></span> </span> +<span class="r-out co"><span class="r-pr">#></span> $runoff</span> +<span class="r-out co"><span class="r-pr">#></span> dissolved bound total</span> +<span class="r-out co"><span class="r-pr">#></span> No buffer 0.21964521 0.94388078 1.16352600</span> +<span class="r-out co"><span class="r-pr">#></span> 3 m 0.16473391 0.66071655 0.82545046</span> +<span class="r-out co"><span class="r-pr">#></span> 5 m 0.13178713 0.56632847 0.69811560</span> +<span class="r-out co"><span class="r-pr">#></span> 6 m 0.12080487 0.42474635 0.54555122</span> +<span class="r-out co"><span class="r-pr">#></span> 10 m 0.08785809 0.14158212 0.22944020</span> +<span class="r-out co"><span class="r-pr">#></span> 20 m 0.04392904 0.04719404 0.09112308</span> +<span class="r-out co"><span class="r-pr">#></span> </span> +<span class="r-out co"><span class="r-pr">#></span> $PEC_sw_runoff</span> +<span class="r-out co"><span class="r-pr">#></span> dissolved bound total</span> +<span class="r-out co"><span class="r-pr">#></span> No buffer 0.8447893 3.6303107 4.4751000</span> +<span class="r-out co"><span class="r-pr">#></span> 3 m 0.7844472 3.1462693 3.9307165</span> +<span class="r-out co"><span class="r-pr">#></span> 5 m 0.7321507 3.1462693 3.8784200</span> +<span class="r-out co"><span class="r-pr">#></span> 6 m 0.7106169 2.4985080 3.2091248</span> +<span class="r-out co"><span class="r-pr">#></span> 10 m 0.6275578 1.0113008 1.6388586</span> +<span class="r-out co"><span class="r-pr">#></span> 20 m 0.4392904 0.4719404 0.9112308</span> +<span class="r-out co"><span class="r-pr">#></span> </span> +</code></pre></div> + </div> </div> + <div class="col-md-3 hidden-xs hidden-sm" id="pkgdown-sidebar"> + <nav id="toc" data-toggle="toc" class="sticky-top"><h2 data-toc-skip>Contents</h2> + </nav></div> </div> - 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