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authorJohannes Ranke <jranke@uni-bremen.de>2017-01-18 22:41:01 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2017-01-18 22:50:14 +0100
commita76221d87485029444c8e684022ca606a0c7e68d (patch)
treec95052ee51b35f6c5ab87bd6f27ef2877f536838 /docs/reference/index.html
parenta1d9f93138c2cfed92a683e37e72c737d52b7ad7 (diff)
Update static docs using pkgdown
- Add _pkgdown.yml for a structured function/data reference - Make seealso links active - Make mkinfit calls quiet - Use pkgdown branch from pull request hadley/pkgdown#229 to have topics ordered
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+<!-- Generated by pkgdown: do not edit by hand -->
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+ <a href="../reference/index.html">Reference</a>
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+ <div class="col-md-9">
+ <div class="page-header">
+ <h1>Function reference</h1>
+ <h4>version&nbsp;0.4-1</h4>
+ </div>
+
+ <div class="contents">
+ <h2 id="section-general-utility-functions" class="hasAnchor"><a href="#section-general-utility-functions" class="anchor"></a>General utility functions</h2>
+ <p class="section-desc"><p>Functions that are independent of specific fate modelling areas</p></p>
+
+
+ <p><a href="geomean.html">Calculate the geometric mean</a></p>
+ <ul>
+ <li><code><a href="geomean.html">geomean</a></code></li>
+ </ul>
+
+ <p><a href="one_box.html">Create a time series of decline data</a></p>
+ <ul>
+ <li><code><a href="one_box.html">one_box</a></code></li><li><code><a href="one_box.html">one_box.numeric</a></code></li><li><code><a href="one_box.html">one_box.mkinfit</a></code></li>
+ </ul>
+
+ <p><a href="plot.one_box.html">Plot time series of decline data</a></p>
+ <ul>
+ <li><code><a href="plot.one_box.html">plot.one_box</a></code></li>
+ </ul>
+
+ <p><a href="sawtooth.html">Create decline time series for multiple applications</a></p>
+ <ul>
+ <li><code><a href="sawtooth.html">sawtooth</a></code></li>
+ </ul>
+
+ <p><a href="twa.html">Calculate a time weighted average concentration</a></p>
+ <ul>
+ <li><code><a href="twa.html">twa</a></code></li><li><code><a href="twa.html">twa.one_box</a></code></li>
+ </ul>
+
+ <p><a href="max_twa.html">The maximum time weighted average concentration for a moving window</a></p>
+ <ul>
+ <li><code><a href="max_twa.html">max_twa</a></code></li>
+ </ul>
+ <h2 id="section-predicted-environmental-concentrations-in-soil" class="hasAnchor"><a href="#section-predicted-environmental-concentrations-in-soil" class="anchor"></a>Predicted environmental concentrations in soil</h2>
+ <p class="section-desc"></p>
+
+
+ <p><a href="PEC_soil.html">Calculate predicted environmental concentrations in soil</a></p>
+ <ul>
+ <li><code><a href="PEC_soil.html">PEC_soil</a></code></li>
+ </ul>
+
+ <p><a href="soil_scenario_data_EFSA_2015.html">Properties of the predefined scenarios from the EFSA guidance from 2015</a></p>
+ <ul>
+ <li><code><a href="soil_scenario_data_EFSA_2015.html">soil_scenario_data_EFSA_2015</a></code></li>
+ </ul>
+ <h2 id="section-predicted-environmental-concentrations-in-surface-water" class="hasAnchor"><a href="#section-predicted-environmental-concentrations-in-surface-water" class="anchor"></a>Predicted environmental concentrations in surface water</h2>
+ <p class="section-desc"></p>
+
+
+ <p><a href="PEC_sw_drift.html">Calculate predicted environmental concentrations in surface water due to drift</a></p>
+ <ul>
+ <li><code><a href="PEC_sw_drift.html">PEC_sw_drift</a></code></li>
+ </ul>
+
+ <p><a href="drift_data_JKI.html">Deposition from spray drift expressed as percent of the applied dose as
+</a></p>
+ <ul>
+ <li><code><a href="drift_data_JKI.html">drift_data_JKI</a></code></li>
+ </ul>
+
+ <p><a href="PEC_sw_drainage_UK.html">Calculate initial predicted environmental concentrations in surface water due to drainage using the UK method</a></p>
+ <ul>
+ <li><code><a href="PEC_sw_drainage_UK.html">PEC_sw_drainage_UK</a></code></li>
+ </ul>
+
+ <p><a href="TOXSWA_cwa.html">R6 class for holding TOXSWA cwa concentration data and associated statistics</a></p>
+ <ul>
+ <li><code><a href="TOXSWA_cwa.html">TOXSWA_cwa</a></code></li>
+ </ul>
+
+ <p><a href="read.TOXSWA_cwa.html">Read TOXSWA surface water concentrations</a></p>
+ <ul>
+ <li><code><a href="read.TOXSWA_cwa.html">read.TOXSWA_cwa</a></code></li>
+ </ul>
+
+ <p><a href="plot.TOXSWA_cwa.html">Plot TOXSWA surface water concentrations</a></p>
+ <ul>
+ <li><code><a href="plot.TOXSWA_cwa.html">plot.TOXSWA_cwa</a></code></li>
+ </ul>
+ <h2 id="section-classifications-and-indicators" class="hasAnchor"><a href="#section-classifications-and-indicators" class="anchor"></a>Classifications and indicators</h2>
+ <p class="section-desc"><p>Evaluating environmental fate properties</p></p>
+
+
+ <p><a href="SSLRC_mobility_classification.html">Determine the SSLRC mobility classification for a chemical substance from its Koc</a></p>
+ <ul>
+ <li><code><a href="SSLRC_mobility_classification.html">SSLRC_mobility_classification</a></code></li>
+ </ul>
+
+ <p><a href="GUS.html">Groundwater ubiquity score based on Gustafson (1989)</a></p>
+ <ul>
+ <li><code><a href="GUS.html">GUS</a></code></li><li><code><a href="GUS.html">GUS.numeric</a></code></li><li><code><a href="GUS.html">GUS.chent</a></code></li><li><code><a href="GUS.html">print.GUS_result</a></code></li>
+ </ul>
+
+ </div>
+ </div>
+
+ <div class="col-md-3 hidden-xs hidden-sm" id="sidebar">
+ <h2>Contents</h2>
+ <ul class="nav nav-pills nav-stacked">
+ <li><a href="#section-general-utility-functions">General utility functions</a></li>
+ <li><a href="#section-predicted-environmental-concentrations-in-soil">Predicted environmental concentrations in soil</a></li>
+ <li><a href="#section-predicted-environmental-concentrations-in-surface-water">Predicted environmental concentrations in surface water</a></li>
+ <li><a href="#section-classifications-and-indicators">Classifications and indicators</a></li>
+ </ul>
+ </div>
+</div>
+
+ <footer>
+ <div class="copyright">
+ <p>Developed by Johannes Ranke.</p>
+</div>
+
+<div class="pkgdown">
+ <p>Site built with <a href="http://hadley.github.io/pkgdown/">pkgdown</a>.</p>
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+
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