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authorJohannes Ranke <jranke@uni-bremen.de>2023-11-12 21:40:01 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2023-11-12 21:40:01 +0100
commitd66bd4aa0bf9c4d9b8793a4e308c9e80691b440f (patch)
tree6bd9d55442019ef452dd21e7714889998668f6d5 /docs/reference/max_twa.html
parent97d0465a296ef1f5ae4502f9374ae339c0a8148e (diff)
Enable links to source, upgrade to bootstrap 5
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+you need to make sure that the length of the time series allows
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you need to make sure that the length of the time series allows
for finding the maximum. It is therefore recommended to check this using
plot.one_box using the window size for the argument
-max_twa." />
-<meta name="twitter:card" content="summary" />
+max_twa."><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script><!--[if lt IE 9]>
+<script src="https://oss.maxcdn.com/html5shiv/3.7.3/html5shiv.min.js"></script>
+<script src="https://oss.maxcdn.com/respond/1.4.2/respond.min.js"></script>
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+ <input type="search" class="form-control me-sm-2" aria-label="Toggle navigation" name="search-input" data-search-index="../search.json" id="search-input" placeholder="Search for" autocomplete="off"></form>
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-<div class="row">
- <div class="col-md-9 contents">
- <div class="page-header">
- <h1>The maximum time weighted average concentration for a moving window</h1>
- <div class="hidden name"><code>max_twa.Rd</code></div>
+ </div>
+</nav><div class="container template-reference-topic">
+<div class="row">
+ <main id="main" class="col-md-9"><div class="page-header">
+ <img src="" class="logo" alt=""><h1>The maximum time weighted average concentration for a moving window</h1>
+ <small class="dont-index">Source: <a href="https://github.com/jranke/pfm/blob/HEAD/R/twa.R" class="external-link"><code>R/twa.R</code></a></small>
+ <div class="d-none name"><code>max_twa.Rd</code></div>
</div>
- <div class="ref-description">
-
- <p>If you generate your time series using <code><a href='sawtooth.html'>sawtooth</a></code>,
+ <div class="ref-description section level2">
+ <p>If you generate your time series using <code><a href="sawtooth.html">sawtooth</a></code>,
you need to make sure that the length of the time series allows
for finding the maximum. It is therefore recommended to check this using
-<code><a href='plot.one_box.html'>plot.one_box</a></code> using the window size for the argument
+<code><a href="plot.one_box.html">plot.one_box</a></code> using the window size for the argument
<code>max_twa</code>.</p>
-
</div>
- <pre class="usage"><span class='fu'>max_twa</span>(<span class='no'>x</span>, <span class='kw'>window</span> <span class='kw'>=</span> <span class='fl'>21</span>)</pre>
-
- <h2 class="hasAnchor" id="arguments"><a class="anchor" href="#arguments"></a>Arguments</h2>
- <table class="ref-arguments">
- <colgroup><col class="name" /><col class="desc" /></colgroup>
- <tr>
- <th>x</th>
- <td><p>An object of type <code><a href='one_box.html'>one_box</a></code></p></td>
- </tr>
- <tr>
- <th>window</th>
- <td><p>The size of the moving window</p></td>
- </tr>
- </table>
-
- <h2 class="hasAnchor" id="details"><a class="anchor" href="#details"></a>Details</h2>
+ <div class="section level2">
+ <h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
+ <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">max_twa</span><span class="op">(</span><span class="va">x</span>, window <span class="op">=</span> <span class="fl">21</span><span class="op">)</span></span></code></pre></div>
+ </div>
+ <div class="section level2">
+ <h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
+ <dl><dt>x</dt>
+<dd><p>An object of type <code><a href="one_box.html">one_box</a></code></p></dd>
+
+
+<dt>window</dt>
+<dd><p>The size of the moving window</p></dd>
+
+</dl></div>
+ <div class="section level2">
+ <h2 id="details">Details<a class="anchor" aria-label="anchor" href="#details"></a></h2>
<p>The method working directly on fitted <code>mkinfit</code> objects uses the
equations given in the PEC soil section of the FOCUS guidance and is restricted
SFO, FOMC and DFOP models and to the parent compound</p>
-
- <h2 class="hasAnchor" id="references"><a class="anchor" href="#references"></a>References</h2>
-
- <p>FOCUS (2006) &#8220;Guidance Document on Estimating Persistence and
+ </div>
+ <div class="section level2">
+ <h2 id="references">References<a class="anchor" aria-label="anchor" href="#references"></a></h2>
+ <p>FOCUS (2006) “Guidance Document on Estimating Persistence and
Degradation Kinetics from Environmental Fate Studies on Pesticides in EU
- Registration&#8221; Report of the FOCUS Work Group on Degradation Kinetics,
+ Registration” Report of the FOCUS Work Group on Degradation Kinetics,
EC Document Reference Sanco/10058/2005 version 2.0, 434 pp,
- <a href='http://esdac.jrc.ec.europa.eu/projects/degradation-kinetics'>http://esdac.jrc.ec.europa.eu/projects/degradation-kinetics</a></p>
-
- <h2 class="hasAnchor" id="see-also"><a class="anchor" href="#see-also"></a>See also</h2>
-
- <div class='dont-index'><p><code><a href='twa.html'>twa</a></code></p></div>
-
-
- <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
- <pre class="examples"><div class='input'><span class='no'>pred</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='sawtooth.html'>sawtooth</a></span>(<span class='fu'><a href='one_box.html'>one_box</a></span>(<span class='fl'>10</span>),
- <span class='kw'>applications</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/data.frame.html'>data.frame</a></span>(<span class='kw'>time</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='fl'>0</span>, <span class='fl'>7</span>), <span class='kw'>amount</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='fl'>1</span>, <span class='fl'>1</span>)))
-<span class='fu'>max_twa</span>(<span class='no'>pred</span>)</div><div class='output co'>#&gt; $max
-#&gt; parent
-#&gt; 0.9537545
-#&gt;
-#&gt; $window_start
-#&gt; parent
-#&gt; 0
-#&gt;
-#&gt; $window_end
-#&gt; parent
-#&gt; 21
-#&gt; </div><div class='input'><span class='no'>pred_FOMC</span> <span class='kw'>&lt;-</span> <span class='fu'>mkinfit</span>(<span class='st'>"FOMC"</span>, <span class='no'>FOCUS_2006_C</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)
-<span class='fu'>max_twa</span>(<span class='no'>pred_FOMC</span>)</div><div class='output co'>#&gt; 21
-#&gt; 18.22124 </div></pre>
- </div>
- <div class="col-md-3 hidden-xs hidden-sm" id="sidebar">
- <h2>Contents</h2>
- <ul class="nav nav-pills nav-stacked">
- <li><a href="#arguments">Arguments</a></li>
-
- <li><a href="#details">Details</a></li>
-
- <li><a href="#references">References</a></li>
-
- <li><a href="#see-also">See also</a></li>
-
- <li><a href="#examples">Examples</a></li>
- </ul>
+ <a href="http://esdac.jrc.ec.europa.eu/projects/degradation-kinetics" class="external-link">http://esdac.jrc.ec.europa.eu/projects/degradation-kinetics</a></p>
+ </div>
+ <div class="section level2">
+ <h2 id="see-also">See also<a class="anchor" aria-label="anchor" href="#see-also"></a></h2>
+ <div class="dont-index"><p><code><a href="twa.html">twa</a></code></p></div>
+ </div>
- </div>
-</div>
+ <div class="section level2">
+ <h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
+ <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">pred</span> <span class="op">&lt;-</span> <span class="fu"><a href="sawtooth.html">sawtooth</a></span><span class="op">(</span><span class="fu"><a href="one_box.html">one_box</a></span><span class="op">(</span><span class="fl">10</span><span class="op">)</span>,</span></span>
+<span class="r-in"><span> applications <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/data.frame.html" class="external-link">data.frame</a></span><span class="op">(</span>time <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">0</span>, <span class="fl">7</span><span class="op">)</span>, amount <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>, <span class="fl">1</span><span class="op">)</span><span class="op">)</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="fu">max_twa</span><span class="op">(</span><span class="va">pred</span><span class="op">)</span></span></span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> $max</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> parent </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 0.9537545 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> $window_start</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> parent </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 0 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> $window_end</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> parent </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 21 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
+<span class="r-in"><span><span class="va">pred_FOMC</span> <span class="op">&lt;-</span> <span class="fu">mkinfit</span><span class="op">(</span><span class="st">"FOMC"</span>, <span class="va">FOCUS_2006_C</span>, quiet <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
+<span class="r-in"><span><span class="fu">max_twa</span><span class="op">(</span><span class="va">pred_FOMC</span><span class="op">)</span></span></span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 21 </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 18.22124 </span>
+</code></pre></div>
+ </div>
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