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+++ b/docs/reference/EFSA_washoff_2017.html
@@ -1,43 +1,5 @@
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- <h1>Subset of EFSA crop washoff default values</h1>
-=======
-<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><meta name="description" content="Subset of EFSA crop washoff default values"><title>Subset of EFSA crop washoff default values — EFSA_washoff_2017 • pfm</title><script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no"><link href="../deps/bootstrap-5.2.2/bootstrap.min.css" rel="stylesheet"><script src="../deps/bootstrap-5.2.2/bootstrap.bundle.min.js"></script><!-- Font Awesome icons --><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous"><link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous"><!-- bootstrap-toc --><script src="https://cdn.jsdelivr.net/gh/afeld/bootstrap-toc@v1.0.1/dist/bootstrap-toc.min.js" integrity="sha256-4veVQbu7//Lk5TSmc7YV48MxtMy98e26cf5MrgZYnwo=" crossorigin="anonymous"></script><!-- headroom.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script><!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script><!-- search --><script src="https://cdnjs.cloudflare.com/ajax/libs/fuse.js/6.4.6/fuse.js" integrity="sha512-zv6Ywkjyktsohkbp9bb45V6tEMoWhzFzXis+LrMehmJZZSys19Yxf1dopHx7WzIKxr5tK2dVcYmaCk2uqdjF4A==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/autocomplete.js/0.38.0/autocomplete.jquery.min.js" integrity="sha512-GU9ayf+66Xx2TmpxqJpliWbT5PiGYxpaG8rfnBEk1LL8l1KGkRShhngwdXK1UgqhAzWpZHSiYPc09/NwDQIGyg==" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mark.js/8.11.1/mark.min.js" integrity="sha512-5CYOlHXGh6QpOFA/TeTylKLWfB3ftPsde7AnmhuitiTX4K5SqCLBeKro6sPS8ilsz1Q4NRx3v8Ko2IBiszzdww==" crossorigin="anonymous"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Subset of EFSA crop washoff default values — EFSA_washoff_2017"><meta property="og:description" content="Subset of EFSA crop washoff default values"><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script><script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script><!--[if lt IE 9]>
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@@ -48,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">pfm</a>
- <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.0</small>
+ <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.6.1</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@@ -70,7 +32,6 @@
</li>
</ul></div>
->>>>>>> refs/remotes/origin/main
</div>
</nav><div class="container template-reference-topic">
@@ -85,28 +46,11 @@
<p>Subset of EFSA crop washoff default values</p>
</div>
- <div id="ref-usage">
+ <div class="section level2">
+ <h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2>
<div class="sourceCode"><pre class="sourceCode r"><code><span><span class="va">EFSA_washoff_2017</span></span></code></pre></div>
</div>
-<<<<<<< HEAD
- <div id="format">
- <h2>Format</h2>
- <p>A matrix containing wash-off factors, currently only for some selected crops</p>
- </div>
- <div id="source">
- <h2>Source</h2>
- <p>European Food Safety Authority (2017) EFSA guidance document for
- predicting environmental concentrations of active substances of plant
- protection products and transformation products of these active substances
- in soil. <em>EFSA Journal</em> <b>15</b>(10) 4982
- doi:10.2903/j.efsa.2017.4982</p>
- </div>
-
- <div id="ref-examples">
- <h2>Examples</h2>
- <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">EFSA_washoff_2017</span></span></span>
-=======
<div class="section level2">
<h2 id="format">Format<a class="anchor" aria-label="anchor" href="#format"></a></h2>
<p>A matrix containing wash-off factors, currently only for some selected crops</p>
@@ -122,36 +66,7 @@ doi:10.2903/j.efsa.2017.4982</p>
<div class="section level2">
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
- <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="kw">if</span> <span class="op">(</span><span class="cn">FALSE</span><span class="op">)</span> <span class="op">{</span></span></span>
-<span class="r-in"><span> <span class="co"># This is the code that was used to define the data</span></span></span>
-<span class="r-in"><span> <span class="va">bbch</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/paste.html" class="external-link">paste0</a></span><span class="op">(</span><span class="fl">0</span><span class="op">:</span><span class="fl">9</span>, <span class="st">"x"</span><span class="op">)</span></span></span>
-<span class="r-in"><span> <span class="va">crops</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span></span></span>
-<span class="r-in"><span> <span class="st">"Beans (field + vegetable)"</span>,</span></span>
-<span class="r-in"><span> <span class="st">"Peas"</span>,</span></span>
-<span class="r-in"><span> <span class="st">"Summer oilseed rape"</span>, <span class="st">"Winter oilseed rape"</span>,</span></span>
-<span class="r-in"><span> <span class="st">"Tomatoes"</span>,</span></span>
-<span class="r-in"><span> <span class="st">"Spring cereals"</span>, <span class="st">"Winter cereals"</span><span class="op">)</span></span></span>
-<span class="r-in"><span> <span class="va">EFSA_washoff_2017</span> <span class="op">&lt;-</span> <span class="fu"><a href="https://rdrr.io/r/base/matrix.html" class="external-link">matrix</a></span><span class="op">(</span><span class="cn">NA</span>, <span class="fu"><a href="https://rdrr.io/r/base/length.html" class="external-link">length</a></span><span class="op">(</span><span class="va">crops</span><span class="op">)</span>, <span class="fu"><a href="https://rdrr.io/r/base/length.html" class="external-link">length</a></span><span class="op">(</span><span class="va">bbch</span><span class="op">)</span>,</span></span>
-<span class="r-in"><span> dimnames <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/list.html" class="external-link">list</a></span><span class="op">(</span>Crop <span class="op">=</span> <span class="va">crops</span>, BBCH <span class="op">=</span> <span class="va">bbch</span><span class="op">)</span><span class="op">)</span></span></span>
-<span class="r-in"><span> <span class="va">EFSA_washoff_2017</span><span class="op">[</span><span class="st">"Beans (field + vegetable)"</span>, <span class="op">]</span> <span class="op">&lt;-</span></span></span>
-<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="cn">NA</span>, <span class="fl">0.6</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.75</span>, <span class="fl">2</span><span class="op">)</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.8</span>, <span class="fl">5</span><span class="op">)</span>, <span class="fl">0.35</span><span class="op">)</span></span></span>
-<span class="r-in"><span> <span class="va">EFSA_washoff_2017</span><span class="op">[</span><span class="st">"Peas"</span>, <span class="op">]</span> <span class="op">&lt;-</span></span></span>
-<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="cn">NA</span>, <span class="fl">0.4</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.6</span>, <span class="fl">2</span><span class="op">)</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.65</span>, <span class="fl">5</span><span class="op">)</span>, <span class="fl">0.35</span><span class="op">)</span></span></span>
-<span class="r-in"><span> <span class="va">EFSA_washoff_2017</span><span class="op">[</span><span class="st">"Summer oilseed rape"</span>, <span class="op">]</span> <span class="op">&lt;-</span></span></span>
-<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="cn">NA</span>, <span class="fl">0.4</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.5</span>, <span class="fl">2</span><span class="op">)</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.6</span>, <span class="fl">5</span><span class="op">)</span>, <span class="fl">0.5</span><span class="op">)</span></span></span>
-<span class="r-in"><span> <span class="va">EFSA_washoff_2017</span><span class="op">[</span><span class="st">"Winter oilseed rape"</span>, <span class="op">]</span> <span class="op">&lt;-</span></span></span>
-<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="cn">NA</span>, <span class="fl">0.1</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.4</span>, <span class="fl">2</span><span class="op">)</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.55</span>, <span class="fl">5</span><span class="op">)</span>, <span class="fl">0.3</span><span class="op">)</span></span></span>
-<span class="r-in"><span> <span class="va">EFSA_washoff_2017</span><span class="op">[</span><span class="st">"Tomatoes"</span>, <span class="op">]</span> <span class="op">&lt;-</span></span></span>
-<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="cn">NA</span>, <span class="fl">0.55</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.75</span>, <span class="fl">2</span><span class="op">)</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.7</span>, <span class="fl">5</span><span class="op">)</span>, <span class="fl">0.35</span><span class="op">)</span></span></span>
-<span class="r-in"><span> <span class="va">EFSA_washoff_2017</span><span class="op">[</span><span class="st">"Spring cereals"</span>, <span class="op">]</span> <span class="op">&lt;-</span></span></span>
-<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="cn">NA</span>, <span class="fl">0.4</span>, <span class="fl">0.5</span>, <span class="fl">0.5</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.65</span>, <span class="fl">3</span><span class="op">)</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.65</span>, <span class="fl">2</span><span class="op">)</span>, <span class="fl">0.55</span><span class="op">)</span></span></span>
-<span class="r-in"><span> <span class="va">EFSA_washoff_2017</span><span class="op">[</span><span class="st">"Winter cereals"</span>, <span class="op">]</span> <span class="op">&lt;-</span></span></span>
-<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="cn">NA</span>, <span class="fl">0.1</span>, <span class="fl">0.4</span>, <span class="fl">0.6</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.55</span>, <span class="fl">3</span><span class="op">)</span>, <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">0.6</span>, <span class="fl">2</span><span class="op">)</span>, <span class="fl">0.4</span><span class="op">)</span></span></span>
-<span class="r-in"><span> <span class="fu"><a href="https://rdrr.io/r/base/save.html" class="external-link">save</a></span><span class="op">(</span><span class="va">EFSA_washoff_2017</span>,</span></span>
-<span class="r-in"><span> file <span class="op">=</span> <span class="st">"../data/EFSA_washoff_2017.RData"</span><span class="op">)</span></span></span>
-<span class="r-in"><span><span class="op">}</span></span></span>
-<span class="r-in"><span><span class="va">EFSA_washoff_2017</span></span></span>
->>>>>>> refs/remotes/origin/main
+ <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">EFSA_washoff_2017</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> BBCH</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Crop 0x 1x 2x 3x 4x 5x 6x 7x 8x 9x</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Beans (field + vegetable) NA 0.60 0.75 0.75 0.80 0.80 0.80 0.80 0.80 0.35</span>
@@ -163,24 +78,6 @@ doi:10.2903/j.efsa.2017.4982</p>
<span class="r-out co"><span class="r-pr">#&gt;</span> Winter cereals NA 0.10 0.40 0.60 0.55 0.55 0.55 0.60 0.60 0.40</span>
</code></pre></div>
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@@ -194,16 +91,10 @@ doi:10.2903/j.efsa.2017.4982</p>
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->>>>>>> refs/remotes/origin/main
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-=======
->>>>>>> refs/remotes/origin/main
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