diff options
Diffstat (limited to 'docs/reference')
| -rw-r--r-- | docs/reference/PEC_sw_drift.html | 30 | ||||
| -rw-r--r-- | docs/reference/drift_parameters_focus.html | 26 | ||||
| -rw-r--r-- | docs/reference/drift_percentages_rautmann_formula.html | 114 | ||||
| -rw-r--r-- | docs/reference/index.html | 5 |
4 files changed, 160 insertions, 15 deletions
diff --git a/docs/reference/PEC_sw_drift.html b/docs/reference/PEC_sw_drift.html index d4cd191..8c5bc3a 100644 --- a/docs/reference/PEC_sw_drift.html +++ b/docs/reference/PEC_sw_drift.html @@ -60,7 +60,10 @@ with input via spray drift.</p> <span> water_depth <span class="op">=</span> <span class="fl">30</span>,</span> <span> drift_percentages <span class="op">=</span> <span class="cn">NULL</span>,</span> <span> drift_data <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"JKI"</span>, <span class="st">"RF"</span><span class="op">)</span>,</span> -<span> crop <span class="op">=</span> <span class="st">"Ackerbau"</span>,</span> +<span> crop_group_JKI <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"Ackerbau"</span>, <span class="st">"Obstbau frueh"</span>, <span class="st">"Obstbau spaet"</span>, <span class="st">"Weinbau frueh"</span>,</span> +<span> <span class="st">"Weinbau spaet"</span>, <span class="st">"Hopfenbau"</span>, <span class="st">"Flaechenkulturen > 900 l/ha"</span>, <span class="st">"Gleisanlagen"</span><span class="op">)</span>,</span> +<span> crop_group_focus <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"arable"</span>, <span class="st">"hops"</span>, <span class="st">"vines, late"</span>, <span class="st">"vines, early"</span>, <span class="st">"fruit, late"</span>,</span> +<span> <span class="st">"fruit, early"</span>, <span class="st">"aerial"</span><span class="op">)</span>,</span> <span> distances <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>, <span class="fl">5</span>, <span class="fl">10</span>, <span class="fl">20</span><span class="op">)</span>,</span> <span> rate_units <span class="op">=</span> <span class="st">"g/ha"</span>,</span> <span> PEC_units <span class="op">=</span> <span class="st">"µg/L"</span></span> @@ -92,8 +95,13 @@ included in the package is used. If 'RF', the Rautmann formula is used, if implemented for the crop type and number of applications</p></dd> -<dt>crop</dt> -<dd><p>Crop name (use German names for JKI data), defaults to "Ackerbau"</p></dd> +<dt>crop_group_JKI</dt> +<dd><p>When using the 'JKI' drift data, one of the German names +as used in <a href="drift_parameters_focus.html">drift_parameters_focus</a>.</p></dd> + + +<dt>crop_group_focus</dt> +<dd><p>One of the crop groups as used in <a href="drift_parameters_focus.html">drift_parameters_focus</a></p></dd> <dt>distances</dt> @@ -127,14 +135,22 @@ implemented for the crop type and number of applications</p></dd> <span class="r-in"><span><span class="co"># Alternatively, we can use the formula for a single application to "Ackerbau" from the paper</span></span></span> <span class="r-in"><span><span class="fu">PEC_sw_drift</span><span class="op">(</span><span class="fl">100</span>, drift_data <span class="op">=</span> <span class="st">"RF"</span><span class="op">)</span></span></span> <span class="r-out co"><span class="r-pr">#></span> 1 m 5 m 10 m 20 m </span> -<span class="r-out co"><span class="r-pr">#></span> 0.92350000 0.19114149 0.09699222 0.04921742 </span> +<span class="r-out co"><span class="r-pr">#></span> 0.91976667 0.19064473 0.09680051 0.04915079 </span> <span class="r-in"><span></span></span> -<span class="r-in"><span><span class="co"># This makes it possible to also use different substances</span></span></span> +<span class="r-in"><span><span class="co"># This makes it possible to also use different distances</span></span></span> <span class="r-in"><span><span class="fu">PEC_sw_drift</span><span class="op">(</span><span class="fl">100</span>, distances <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>, <span class="fl">3</span>, <span class="fl">5</span>, <span class="fl">6</span>, <span class="fl">10</span>, <span class="fl">20</span>, <span class="fl">50</span>, <span class="fl">100</span><span class="op">)</span>, drift_data <span class="op">=</span> <span class="st">"RF"</span><span class="op">)</span></span></span> <span class="r-out co"><span class="r-pr">#></span> 1 m 3 m 5 m 6 m 10 m 20 m 50 m </span> -<span class="r-out co"><span class="r-pr">#></span> 0.92350000 0.31512171 0.19114149 0.15990435 0.09699222 0.04921742 0.02007497 </span> +<span class="r-out co"><span class="r-pr">#></span> 0.91976667 0.31415827 0.19064473 0.15951494 0.09680051 0.04915079 0.02006434 </span> +<span class="r-out co"><span class="r-pr">#></span> 100 m </span> +<span class="r-out co"><span class="r-pr">#></span> 0.01018774 </span> +<span class="r-in"><span></span></span> +<span class="r-in"><span><span class="co"># or consider aerial application</span></span></span> +<span class="r-in"><span><span class="fu">PEC_sw_drift</span><span class="op">(</span><span class="fl">100</span>, distances <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>, <span class="fl">3</span>, <span class="fl">5</span>, <span class="fl">6</span>, <span class="fl">10</span>, <span class="fl">20</span>, <span class="fl">50</span>, <span class="fl">100</span><span class="op">)</span>, drift_data <span class="op">=</span> <span class="st">"RF"</span>, </span></span> +<span class="r-in"><span> crop_group_focus <span class="op">=</span> <span class="st">"aerial"</span><span class="op">)</span></span></span> +<span class="r-out co"><span class="r-pr">#></span> 1 m 3 m 5 m 6 m 10 m 20 m 50 m </span> +<span class="r-out co"><span class="r-pr">#></span> 16.8233333 11.0585820 9.0986174 8.4866460 6.9825178 4.7004640 1.8820816 </span> <span class="r-out co"><span class="r-pr">#></span> 100 m </span> -<span class="r-out co"><span class="r-pr">#></span> 0.01018678 </span> +<span class="r-out co"><span class="r-pr">#></span> 0.9417586 </span> <span class="r-in"><span></span></span> <span class="r-in"><span><span class="co"># Using custom drift percentages is also supported</span></span></span> <span class="r-in"><span><span class="fu">PEC_sw_drift</span><span class="op">(</span><span class="fl">100</span>, drift_percentages <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">2.77</span>, <span class="fl">0.95</span>, <span class="fl">0.57</span>, <span class="fl">0.48</span>, <span class="fl">0.29</span>, <span class="fl">0.15</span>, <span class="fl">0.06</span>, <span class="fl">0.03</span><span class="op">)</span><span class="op">)</span></span></span> diff --git a/docs/reference/drift_parameters_focus.html b/docs/reference/drift_parameters_focus.html index 4c7539a..c3f6386 100644 --- a/docs/reference/drift_parameters_focus.html +++ b/docs/reference/drift_parameters_focus.html @@ -65,6 +65,13 @@ as its licence is not clear.</p> <p>A <a href="https://tibble.tidyverse.org/reference/tibble.html" class="external-link">tibble::tibble</a>.</p> </div> <div class="section level2"> + <h2 id="details">Details<a class="anchor" aria-label="anchor" href="#details"></a></h2> + <p>For the hinge distance, <code>Inf</code> was substituted for the cases where no hinge +distance is given in the data, in this way parameters C and D are never +used for any distance if A and B are used for the case that the distance +is smaller than the hinge distance.</p> + </div> + <div class="section level2"> <h2 id="references">References<a class="anchor" aria-label="anchor" href="#references"></a></h2> <p>FOCUS (2014) Generic guidance for Surface Water Scenarios (version 1.4). FOrum for the Co-ordination of pesticde fate models and their USe. @@ -84,17 +91,20 @@ Bundesanst. Land- Forstwirtsch. 383, 133-141</p> <span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># A tibble: 49 × 8</span></span> <span class="r-out co"><span class="r-pr">#></span> crop_group n_apps percentile A B C D hinge</span> <span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494; font-style: italic;"><chr></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><int></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span> <span style="color: #949494; font-style: italic;"><dbl></span></span> -<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> arable 1 90 2.76 -<span style="color: #BB0000;">0.978</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span> -<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 2</span> arable 2 82 2.44 -<span style="color: #BB0000;">1.01</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span> -<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 3</span> arable 3 77 2.02 -<span style="color: #BB0000;">0.996</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span> -<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 4</span> arable 4 74 1.86 -<span style="color: #BB0000;">0.986</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span> -<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 5</span> arable 5 72 1.79 -<span style="color: #BB0000;">0.994</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span> -<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 6</span> arable 6 70 1.63 -<span style="color: #BB0000;">0.986</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span> -<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 7</span> arable 7 69 1.58 -<span style="color: #BB0000;">0.981</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span> -<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 8</span> arable 8 67 1.51 -<span style="color: #BB0000;">0.983</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> </span> +<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 1</span> arable 1 90 2.76 -<span style="color: #BB0000;">0.978</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">Inf</span> </span> +<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 2</span> arable 2 82 2.44 -<span style="color: #BB0000;">1.01</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">Inf</span> </span> +<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 3</span> arable 3 77 2.02 -<span style="color: #BB0000;">0.996</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">Inf</span> </span> +<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 4</span> arable 4 74 1.86 -<span style="color: #BB0000;">0.986</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">Inf</span> </span> +<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 5</span> arable 5 72 1.79 -<span style="color: #BB0000;">0.994</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">Inf</span> </span> +<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 6</span> arable 6 70 1.63 -<span style="color: #BB0000;">0.986</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">Inf</span> </span> +<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 7</span> arable 7 69 1.58 -<span style="color: #BB0000;">0.981</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">Inf</span> </span> +<span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 8</span> arable 8 67 1.51 -<span style="color: #BB0000;">0.983</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">NA</span> <span style="color: #BB0000;">Inf</span> </span> <span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;"> 9</span> hops 1 90 58.2 -<span style="color: #BB0000;">1.00</span> <span style="text-decoration: underline;">8</span>655. -<span style="color: #BB0000;">2.84</span> 15.3</span> <span class="r-out co"><span class="r-pr">#></span> <span style="color: #BCBCBC;">10</span> hops 2 82 66.2 -<span style="color: #BB0000;">1.20</span> <span style="text-decoration: underline;">5</span>555. -<span style="color: #BB0000;">2.82</span> 15.3</span> <span class="r-out co"><span class="r-pr">#></span> <span style="color: #949494;"># ℹ 39 more rows</span></span> +<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/unique.html" class="external-link">unique</a></span><span class="op">(</span><span class="va">drift_parameters_focus</span><span class="op">$</span><span class="va">crop_group</span><span class="op">)</span></span></span> +<span class="r-out co"><span class="r-pr">#></span> [1] "arable" "hops" "vines, late" "vines, early" "fruit, late" </span> +<span class="r-out co"><span class="r-pr">#></span> [6] "fruit, early" "aerial" </span> </code></pre></div> </div> </main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2> diff --git a/docs/reference/drift_percentages_rautmann_formula.html b/docs/reference/drift_percentages_rautmann_formula.html new file mode 100644 index 0000000..3d51fb0 --- /dev/null +++ b/docs/reference/drift_percentages_rautmann_formula.html @@ -0,0 +1,114 @@ +<!DOCTYPE html> +<!-- Generated by pkgdown: do not edit by hand --><html lang="en"><head><meta 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class="col-md-9"><div class="page-header"> + <img src="" class="logo" alt=""><h1>Calculate the drift percentages according to the Rautmann formula</h1> + <small class="dont-index">Source: <a href="https://github.com/jranke/pfm/blob/HEAD/R/PEC_sw_drift.R" class="external-link"><code>R/PEC_sw_drift.R</code></a></small> + <div class="d-none name"><code>drift_percentages_rautmann_formula.Rd</code></div> + </div> + + <div class="ref-description section level2"> + <p>Calculate the drift percentages according to the Rautmann formula</p> + </div> + + <div class="section level2"> + <h2 id="ref-usage">Usage<a class="anchor" aria-label="anchor" href="#ref-usage"></a></h2> + <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">drift_percentages_rautmann_formula</span><span class="op">(</span></span> +<span> <span class="va">distances</span>,</span> +<span> applications <span class="op">=</span> <span class="fl">1</span>,</span> +<span> crop_group_focus <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="st">"arable"</span>, <span class="st">"hops"</span>, <span class="st">"vines, late"</span>, <span class="st">"vines, early"</span>, <span class="st">"fruit, late"</span>,</span> +<span> <span class="st">"fruit, early"</span>, <span class="st">"aerial"</span><span class="op">)</span></span> +<span><span class="op">)</span></span></code></pre></div> + </div> + + <div class="section level2"> + <h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2> + <dl><dt>distances</dt> +<dd><p>The distances in m for which to get PEC values</p></dd> + + +<dt>applications</dt> +<dd><p>Number of applications for selection of drift percentile</p></dd> + + +<dt>crop_group_focus</dt> +<dd><p>One of the crop groups as used in <a href="drift_parameters_focus.html">drift_parameters_focus</a></p></dd> + +</dl></div> + + <div class="section level2"> + <h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2> + <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">drift_data_JKI</span><span class="op">[[</span><span class="fl">1</span><span class="op">]</span><span class="op">]</span><span class="op">[</span><span class="fu"><a href="https://rdrr.io/r/base/character.html" class="external-link">as.character</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>, <span class="fl">3</span>, <span class="fl">5</span><span class="op">)</span><span class="op">)</span>, <span class="st">"Ackerbau"</span><span class="op">]</span></span></span> +<span class="r-out co"><span class="r-pr">#></span> 1 3 5 </span> +<span class="r-out co"><span class="r-pr">#></span> 2.77 0.95 0.57 </span> +<span class="r-in"><span><span class="fu">drift_percentages_rautmann_formula</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">1</span>, <span class="fl">3</span>, <span class="fl">5</span><span class="op">)</span><span class="op">)</span></span></span> +<span class="r-out co"><span class="r-pr">#></span> [1] 2.7593000 0.9424748 0.5719342</span> +<span class="r-in"><span></span></span> +<span class="r-in"><span><span class="co"># One application to early or late fruit crops</span></span></span> +<span class="r-in"><span><span class="va">drift_data_JKI</span><span class="op">[[</span><span class="fl">1</span><span class="op">]</span><span class="op">]</span><span class="op">[</span><span class="fu"><a href="https://rdrr.io/r/base/character.html" class="external-link">as.character</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">3</span>, <span class="fl">5</span>, <span class="fl">20</span>, <span class="fl">50</span><span class="op">)</span><span class="op">)</span>, <span class="st">"Obstbau frueh"</span><span class="op">]</span></span></span> +<span class="r-out co"><span class="r-pr">#></span> 3 5 20 50 </span> +<span class="r-out co"><span class="r-pr">#></span> 29.20 19.89 2.77 0.30 </span> +<span class="r-in"><span><span class="fu">drift_percentages_rautmann_formula</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">3</span>, <span class="fl">5</span>, <span class="fl">20</span>, <span class="fl">50</span><span class="op">)</span>, crop_group <span class="op">=</span> <span class="st">"fruit, early"</span><span class="op">)</span></span></span> +<span class="r-out co"><span class="r-pr">#></span> [1] 29.1973659 19.8844422 2.7618138 0.3012008</span> +<span class="r-in"><span><span class="va">drift_data_JKI</span><span class="op">[[</span><span class="fl">1</span><span class="op">]</span><span class="op">]</span><span class="op">[</span><span class="fu"><a href="https://rdrr.io/r/base/character.html" class="external-link">as.character</a></span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">3</span>, <span class="fl">5</span>, <span class="fl">20</span>, <span class="fl">50</span><span class="op">)</span><span class="op">)</span>, <span class="st">"Obstbau spaet"</span><span class="op">]</span></span></span> +<span class="r-out co"><span class="r-pr">#></span> 3 5 20 50 </span> +<span class="r-out co"><span class="r-pr">#></span> 15.73 8.41 1.09 0.22 </span> +<span class="r-in"><span><span class="fu">drift_percentages_rautmann_formula</span><span class="op">(</span><span class="fu"><a href="https://rdrr.io/r/base/c.html" class="external-link">c</a></span><span class="op">(</span><span class="fl">3</span>, <span class="fl">5</span>, <span class="fl">20</span>, <span class="fl">50</span><span class="op">)</span>, crop_group <span class="op">=</span> <span class="st">"fruit, late"</span><span class="op">)</span></span></span> +<span class="r-out co"><span class="r-pr">#></span> [1] 15.7246994 8.4108487 1.0813887 0.2155992</span> +</code></pre></div> + </div> + </main><aside class="col-md-3"><nav id="toc"><h2>On this page</h2> + </nav></aside></div> + + + <footer><div class="pkgdown-footer-left"> + <p></p><p>Developed by Johannes Ranke.</p> +</div> + +<div class="pkgdown-footer-right"> + <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.7.</p> +</div> + + </footer></div> + + + + + + </body></html> + diff --git a/docs/reference/index.html b/docs/reference/index.html index 7f0b768..24f3012 100644 --- a/docs/reference/index.html +++ b/docs/reference/index.html @@ -197,6 +197,11 @@ published by the JKI</dd> <dd>Regression parameters for the Rautmann drift data</dd> </dl><dl><dt> + <code><a href="drift_percentages_rautmann_formula.html">drift_percentages_rautmann_formula()</a></code> + </dt> + <dd>Calculate the drift percentages according to the Rautmann formula</dd> + </dl><dl><dt> + <code><a href="PEC_sw_drainage_UK.html">PEC_sw_drainage_UK()</a></code> </dt> <dd>Calculate initial predicted environmental concentrations in surface water due to drainage using the UK method</dd> |