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-<!DOCTYPE html>
-<html lang="en">
- <head>
- <meta charset="utf-8">
-<title>read.TOXSWA_cwa. pfm 0.3-7</title>
-<meta name="viewport" content="width=device-width, initial-scale=1.0">
-<meta name="author" content="
-Johannes Ranke
-">
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- <div class="container">
- <a class="brand" href="#">pfm 0.3-7</a>
- <div class="nav">
- <ul class="nav">
- <li><a href="index.html"><i class="icon-home icon-white"></i> Index</a></li>
- </ul>
- </div>
- </div>
- </div>
-</div>
-
- <div class="container">
- <header>
-
- </header>
-
- <h1>Read TOXSWA surface water concentrations</h1>
-
-<div class="row">
- <div class="span8">
- <h2>Usage</h2>
- <pre><div>read.TOXSWA_cwa(filename, basedir&nbsp;=&nbsp;".", zipfile&nbsp;=&nbsp;NULL, segment&nbsp;=&nbsp;"last", substance&nbsp;=&nbsp;"parent", total&nbsp;=&nbsp;FALSE, windows&nbsp;=&nbsp;NULL, thresholds&nbsp;=&nbsp;NULL)</div></pre>
-
- <h2>Arguments</h2>
- <dl>
- <dt>filename</dt>
- <dd>The filename of the cwa file (TOXSWA 2.x.y or similar) or the
-out file (FOCUS TOXSWA 4, i.e. TOXSWA 4.4.2 or similar).</dd>
- <dt>basedir</dt>
- <dd>The path to the directory where the cwa file resides.</dd>
- <dt>zipfile</dt>
- <dd>Optional path to a zip file containing the cwa file.</dd>
- <dt>segment</dt>
- <dd>The segment for which the data should be read. Either "last", or
-the segment number.</dd>
- <dt>substance</dt>
- <dd>For TOXSWA 4 .out files, the default value "parent" leads
-to reading concentrations of the parent compound. Alternatively, the substance
-of interested can be selected by its code name.</dd>
- <dt>total</dt>
- <dd>Set this to TRUE in order to read total concentrations as well. This is
-only necessary for .out files as generated by TOXSWA 4.4.2 or similar, not for .cwa
-files. For .cwa files, the total concentration is always read as well.</dd>
- <dt>windows</dt>
- <dd>Numeric vector of width of moving windows in days, for calculating
-maximum time weighted average concentrations and areas under the curve.</dd>
- <dt>thresholds</dt>
- <dd>Numeric vector of threshold concentrations in µg/L for
-generating event statistics.</dd>
- </dl>
-
- <div class="Value">
- <h2>Value</h2>
-
- <p><dl>
-An instance of an R6 object of class
-<code><a href='TOXSWA_cwa.html'>TOXSWA_cwa</a></code>.
-</dl></p>
-
- </div>
-
- <div class="Description">
- <h2>Description</h2>
-
- <p>Read TOXSWA hourly concentrations of a chemical substance in a specific
-segment of a TOXSWA surface water body. Per default, the data for the last
-segment are imported. As TOXSWA 4 reports the values at the end of the hour
-(ConLiqWatLayCur) in its summary file, we use this value as well instead
-of the hourly averages (ConLiqWatLay).</p>
-
- </div>
-
- <h2 id="examples">Examples</h2>
- <pre class="examples"><div class='input'>H_sw_D4_pond &lt;- read.TOXSWA_cwa(&quot;00001p_pa.cwa&quot;,
- basedir = &quot;SwashProjects/project_H_sw/TOXSWA&quot;,
- zipfile = system.file(&quot;testdata/SwashProjects.zip&quot;,
- package = &quot;pfm&quot;))
-</div></pre>
- </div>
- <div class="span4">
- <!-- <ul>
- <li>read.TOXSWA_cwa</li>
- </ul>
- <ul>
-
- </ul> -->
-
-
- <h2>Author</h2>
-
-Johannes Ranke
-
-
- </div>
-</div>
-
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