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2022-11-10Revert standalone option for remotes on travisJohannes Ranke1-2/+0
2022-11-10Yet another attempt on remotes on travisJohannes Ranke1-1/+2
2022-11-10Another attempt to make remotes work on travisJohannes Ranke1-1/+1
2022-11-10Try to make remotes workJohannes Ranke1-0/+1
2022-11-10Skip BSPM, it's the defaultJohannes Ranke1-3/+1
2022-11-10Only install dependencies, as chents fails to installJohannes Ranke1-1/+1
2022-11-10Use Dirks run.sh on travisJohannes Ranke1-7/+36
2022-11-10set_nd_nq is now in mkin, fix Steps12 bugJohannes Ranke13-398/+75
If a scenario with a slash "/" was selected in PEC_sw_focus(), the Step 2 file generated giving an error (path not found) in the Steps12 calculator, because the scenario name is part of the "compound" name in this implementation, in order to show it in the list that the calculator presents.
2021-11-19Update static docsJohannes Ranke8-28/+31
2021-11-19Update docs and logsJohannes Ranke5-24/+47
2021-11-18Update README after changing default branch to mainJohannes Ranke2-65/+71
2021-02-10Treat Kfoc = 0 like Exposit in runoff calcsJohannes Ranke1-1/+2
2020-07-23PEC_sw_drift: Rautmann formula (1 app, Ackerbau)Johannes Ranke14-56/+119
This makes it possible to calculate drift PECsw for other distances than present in the JKI data or the Rautmann paper.
2020-07-23Update docs, use R6 support of roxygenJohannes Ranke15-135/+225
2020-07-21Clean test.log after testingJohannes Ranke3-13/+26
2020-07-07Remove copyright headers, update TOXSWA_cwa testJohannes Ranke22-213/+50
- The window column of the windows component of a TOXSWA_cwa object is not a factor any more, but a character vector. - testthat::expect_equal_to_reference is replaced by testthat::expect_known_output, so we can have git diff show what has changed
2020-07-07Adapt pfm_degradation to current mkinJohannes Ranke2-26/+9
use_of_ff = "max" is now the default
2020-06-17TSCF estimation equations, update docsJohannes Ranke39-383/+1008
Briggs et al. (1982) and Dettenmaier et al. (2009)
2020-04-17Skip testing on R-develJohannes Ranke1-1/+0
it currently fails with ✖ | 6 1 | Read and analyse TOXSWA cwa files [6.4 s] ──────────────────────────────────────────────────────────────────────────────────────────────────── test_TOXSWA.R:68: failure: Getting events and moving window analysis works H_sw_R1_stream$windows has changed from known value recorded in 'H_sw_R1_stream_windows.rds'. Component "window": Modes: character, numeric Component "window": Attributes: < target is NULL, current is list > Component "window": target is character, current is factor
2020-04-16Make na.rm = FALSE the default for geomean()Johannes Ranke51-412/+723
This makes more sense and is in line with mean() from base R. Adapt tests and update docs.
2020-02-19Check in last build logJohannes Ranke3-3/+15
2019-10-23Fix static docs for set_nd_nqJohannes Ranke7-53/+27
2019-10-23Updated ChangeLog and DESCRIPTIONJohannes Ranke2-1/+7
2019-10-15Residue processing for depth profiles over timeJohannes Ranke14-427/+627
2019-10-10Do not mess with zero values at time zeroJohannes Ranke3-21/+32
2019-10-10Fix set_nd for metabolites, handle zero at time zeroJohannes Ranke5-9/+23
2019-10-10Fix documentation for set_ndJohannes Ranke4-61/+26
2019-10-10Finish documentation of set_nd and test itJohannes Ranke10-18/+339
2019-10-09Function to set non-detects in residue seriesJohannes Ranke6-4/+187
2019-09-27Built windows binary for dratJohannes Ranke2-10/+7
2019-09-27Fix for UK drainage, some EFSA interception and washoffJohannes Ranke77-2042/+758
- PEC_sw_drainage_UK() gave results that were a little bit too high for the substances with the highest Koc (>4000), as I used 0.01% instead of 0.008% for them. This must have come from an old vesion of the UK data requirements handbook, at least I do not have another explanation - Add EFSA interception (from 2014 DegT50 guidance) and tier 1 crop wash-off factors (from 2017 PEC soil guidance) for some major arable crops - Update docs
2019-09-18Add url: tag to _pkgdown.yml, typo, update docsJohannes Ranke46-592/+955
2019-07-01TypoJohannes Ranke1-1/+1
2019-06-12Update of static docsJohannes Ranke51-49/+49
2019-06-12Documentation fixJohannes Ranke2-3/+8
2019-05-14Version bump and doc updateJohannes Ranke39-38/+47
2019-05-14Add Exposit version 3.01a2 for runoff calculationsJohannes Ranke14-27/+91
At the request of Muris Korkaric (Agroscope). This is for 3 m buffer only and provides consistency with earlier calculations
2019-04-29Additional runoff data used by AgroscopeJohannes Ranke5-5/+34
2019-04-26Formatting improvement for the online docsJohannes Ranke3-2/+4
2019-04-26Another take on completing the drift dataJohannes Ranke42-307/+352
The R script I used yesterday got lost because I used the .Rd file that got overwritten by roxygen later.
2019-04-25Add more drift data, especially 3 m field crop dataJohannes Ranke46-170/+363
To support Agroscope in doing lots of PEC calculations for Switzerland
2019-04-25Remove leftover docs from earlier versionJohannes Ranke36-11025/+0
Docs now live in docs/
2019-02-21Update docsJohannes Ranke1-1/+9
2019-02-21Use codecovJohannes Ranke5-4/+37
2019-02-19Add grImport to Suggests:Johannes Ranke2-0/+2
Because chent which in turn suggests grImport is loaded from github which obviously does not pull grImport
2019-02-19Update README.htmlJohannes Ranke1-0/+1
2019-02-19Add Remotes: field for travisJohannes Ranke1-0/+3
2019-02-19Test on TravisJohannes Ranke2-0/+7
2019-02-19Add another test for Exposit drainageJohannes Ranke3-2/+30
to test overriding the mobility group derived from Koc
2019-02-19Stop endless appending to pesticide.txt exampleJohannes Ranke4-53/+3

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