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2020-04-16Make na.rm = FALSE the default for geomean()Johannes Ranke24-302/+410
This makes more sense and is in line with mean() from base R. Adapt tests and update docs.
2019-10-23Fix static docs for set_nd_nqJohannes Ranke2-41/+15
2019-10-15Residue processing for depth profiles over timeJohannes Ranke3-225/+292
2019-10-10Fix set_nd for metabolites, handle zero at time zeroJohannes Ranke1-2/+2
2019-10-10Fix documentation for set_ndJohannes Ranke2-46/+12
2019-10-10Finish documentation of set_nd and test itJohannes Ranke2-0/+262
2019-09-27Fix for UK drainage, some EFSA interception and washoffJohannes Ranke55-1875/+473
- PEC_sw_drainage_UK() gave results that were a little bit too high for the substances with the highest Koc (>4000), as I used 0.01% instead of 0.008% for them. This must have come from an old vesion of the UK data requirements handbook, at least I do not have another explanation - Add EFSA interception (from 2014 DegT50 guidance) and tier 1 crop wash-off factors (from 2017 PEC soil guidance) for some major arable crops - Update docs
2019-09-18Add url: tag to _pkgdown.yml, typo, update docsJohannes Ranke36-528/+642
2019-06-12Update of static docsJohannes Ranke47-43/+44
2019-05-14Version bump and doc updateJohannes Ranke34-34/+34
2019-05-14Add Exposit version 3.01a2 for runoff calculationsJohannes Ranke7-14/+61
At the request of Muris Korkaric (Agroscope). This is for 3 m buffer only and provides consistency with earlier calculations
2019-04-26Formatting improvement for the online docsJohannes Ranke1-2/+2
2019-04-26Another take on completing the drift dataJohannes Ranke34-287/+239
The R script I used yesterday got lost because I used the .Rd file that got overwritten by roxygen later.
2019-04-25Add more drift data, especially 3 m field crop dataJohannes Ranke38-154/+327
To support Agroscope in doing lots of PEC calculations for Switzerland
2019-02-19Stop endless appending to pesticide.txt exampleJohannes Ranke2-51/+1
2019-02-19Add German drainage calculations using Exposit 3.02Johannes Ranke5-14/+265
2019-01-31Separate out PELMO utilities into rPELMOJohannes Ranke34-541/+730
2018-09-22Add test and update docsJohannes Ranke43-48/+362
2018-07-10Update static docsJohannes Ranke41-54/+303
2018-07-04Some documentation updatesJohannes Ranke6-12/+16
Document that TOXSWA 5.5.3 is supported in the help files
2018-06-20Advertise drat repoJohannes Ranke2-1/+3
2018-06-20Update static docsJohannes Ranke40-40/+227
2018-06-06Rebuild docs with pkgdown 1.1.0Johannes Ranke52-439/+1400
2018-03-01Rebuild static docs using current pkdownJohannes Ranke52-119/+676
Process PELMO runs in example using 15 (hyperthreading) cores and show processor info.
2018-01-29Merge branch 'master' of kolab:pfmJohannes Ranke2-3/+1
Conflicts: docs/reference/PELMO_runs.html docs/reference/pesticide.txt
2018-01-29Documentation fixes and updatesJohannes Ranke6-6/+11
2018-01-29Documentation fixes and updatesJohannes Ranke5-5/+9
2018-01-29Correction of return value documentation for PEC_sw_exposit_runoffJohannes Ranke12-24/+40
Rebuild pkgdown documentation
2017-10-27Exposit runoff calculations for surface waterJohannes Ranke7-1/+614
2017-10-23Typos, rebuild static docsJohannes Ranke4-4/+6
2017-07-21New Option for Step 1, fix example, update docsJohannes Ranke5-15/+81
Also add the reference file for testing Step12 input file generation
2017-05-24Fix for the sawtooth function for repeated applicationsJohannes Ranke5-6/+6
For n > 2, the second application was made at 2 * i instead of i.
2017-05-24Re-enable PELMO examples and testsJohannes Ranke10-24/+54
- Add .gitattributes to make sure CRLF line endings are kept for PELMO .psm files - Update static docs
2017-05-17Documentation fixJohannes Ranke1-2/+2
2017-05-16Update static documentationJohannes Ranke2-27/+32
2017-05-16Finish the Step 1 calculator including testsJohannes Ranke39-781/+1644
Some cleaning up. PELMO facilities do not currently work at my end, as I have no working wine installation on this computer
2017-03-06Move static docs to pkdown.jrwb.de, update themJohannes Ranke1-1/+1
2017-01-31Small documentation fixJohannes Ranke1-2/+2
2017-01-30Regenerate static documentationJohannes Ranke1-1/+1
2017-01-30Correct psm file in the example with metabolitesJohannes Ranke2-2/+75
2017-01-30Better documentation of PELMO_runs().Johannes Ranke1-4/+6
2017-01-29Setting up PELMO runs, execution and evaluationJohannes Ranke14-2/+1408
It all works!
2017-01-19Another correction of the docsJohannes Ranke1-5/+5
2017-01-19Corrections in the documentationJohannes Ranke1-7/+18
2017-01-19Correct default y axis label for plot.one_boxJohannes Ranke9-1/+1
2017-01-19Fix one_box for ini = 1, use in sawtooth examplesJohannes Ranke5-5/+5
2017-01-19Move mkin::twa to pfm::max_twa.mkinfitJohannes Ranke7-8/+53
- Add max_twa.mkinfit() recently introduced to mkin as mkin::twa() but never released with it - Add a test to check max_twa.one_box() against analytical solutions in max_twa.mkinfit(). - Clean up R CMD check - Update docs
2017-01-19Documentation updatesJohannes Ranke1-4/+3
2017-01-19Fix order of arguments to one_box, correct docsJohannes Ranke3-7/+9
2017-01-19Predict parent decline without fitting for non-SFO modelsJohannes Ranke5-4/+11

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