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<h1>
Reference
<small>version 0.4-5</small>
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<table class="ref-index">
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<col class="title" />
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<th colspan="2">
<h2 id="section-general-utility-functions" class="hasAnchor"><a href="#section-general-utility-functions" class="anchor"></a>General utility functions</h2>
<p class="section-desc"><p>Functions that are independent of specific fate modelling areas</p></p>
</th>
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<tr>
<!-- -->
<td>
<p><code><a href="geomean.html">geomean</a></code> </p>
</td>
<td><p>Calculate the geometric mean</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="one_box.html">one_box</a></code> </p>
</td>
<td><p>Create a time series of decline data</p></td>
</tr><tr>
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<td>
<p><code><a href="plot.one_box.html">plot</a></code> </p>
</td>
<td><p>Plot time series of decline data</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="sawtooth.html">sawtooth</a></code> </p>
</td>
<td><p>Create decline time series for multiple applications</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="twa.html">twa</a></code> </p>
</td>
<td><p>Calculate a time weighted average concentration</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="max_twa.html">max_twa</a></code> </p>
</td>
<td><p>The maximum time weighted average concentration for a moving window</p></td>
</tr>
</tbody><tbody>
<tr>
<th colspan="2">
<h2 id="section-predicted-environmental-concentrations-in-soil" class="hasAnchor"><a href="#section-predicted-environmental-concentrations-in-soil" class="anchor"></a>Predicted environmental concentrations in soil</h2>
<p class="section-desc"></p>
</th>
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<p><code><a href="PEC_soil.html">PEC_soil</a></code> </p>
</td>
<td><p>Calculate predicted environmental concentrations in soil</p></td>
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<p><code><a href="soil_scenario_data_EFSA_2015.html">soil_scenario_data_EFSA_2015</a></code> </p>
</td>
<td><p>Properties of the predefined scenarios from the EFSA guidance from 2015</p></td>
</tr>
</tbody><tbody>
<tr>
<th colspan="2">
<h2 id="section-predicted-environmental-concentrations-in-groundwater" class="hasAnchor"><a href="#section-predicted-environmental-concentrations-in-groundwater" class="anchor"></a>Predicted environmental concentrations in groundwater</h2>
<p class="section-desc"></p>
</th>
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<td>
<p><code><a href="PELMO_runs.html">PELMO_runs</a></code> <code><a href="PELMO_runs.html">run_PELMO</a></code> <code><a href="PELMO_runs.html">evaluate_PELMO</a></code> </p>
</td>
<td><p>Set up runs for FOCUS PELMO</p></td>
</tr>
</tbody><tbody>
<tr>
<th colspan="2">
<h2 id="section-predicted-environmental-concentrations-in-surface-water" class="hasAnchor"><a href="#section-predicted-environmental-concentrations-in-surface-water" class="anchor"></a>Predicted environmental concentrations in surface water</h2>
<p class="section-desc"></p>
</th>
</tr>
<tr>
<!-- -->
<td>
<p><code><a href="PEC_sw_drift.html">PEC_sw_drift</a></code> </p>
</td>
<td><p>Calculate predicted environmental concentrations in surface water due to drift</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="drift_data_JKI.html">drift_data_JKI</a></code> </p>
</td>
<td><p>Deposition from spray drift expressed as percent of the applied dose as
published by the JKI</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="PEC_sw_drainage_UK.html">PEC_sw_drainage_UK</a></code> </p>
</td>
<td><p>Calculate initial predicted environmental concentrations in surface water due to drainage using the UK method</p></td>
</tr><tr>
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<td>
<p><code><a href="PEC_sw_focus.html">PEC_sw_focus</a></code> </p>
</td>
<td><p>Calculate PEC surface water at FOCUS Step 1</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="PEC_sw_exposit_runoff.html">PEC_sw_exposit_runoff</a></code> </p>
</td>
<td><p>Calculate PEC surface water due to runoff and erosion as in Exposit 3</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="TOXSWA_cwa.html">TOXSWA_cwa</a></code> </p>
</td>
<td><p>R6 class for holding TOXSWA cwa concentration data and associated statistics</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="read.TOXSWA_cwa.html">read.TOXSWA_cwa</a></code> </p>
</td>
<td><p>Read TOXSWA surface water concentrations</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="plot.TOXSWA_cwa.html">plot</a></code> </p>
</td>
<td><p>Plot TOXSWA surface water concentrations</p></td>
</tr>
</tbody><tbody>
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<th colspan="2">
<h2 id="section-classifications-and-indicators" class="hasAnchor"><a href="#section-classifications-and-indicators" class="anchor"></a>Classifications and indicators</h2>
<p class="section-desc"><p>Evaluating environmental fate properties</p></p>
</th>
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<tr>
<!-- -->
<td>
<p><code><a href="SSLRC_mobility_classification.html">SSLRC_mobility_classification</a></code> </p>
</td>
<td><p>Determine the SSLRC mobility classification for a chemical substance from its Koc</p></td>
</tr><tr>
<!-- -->
<td>
<p><code><a href="GUS.html">GUS</a></code> <code><a href="GUS.html">print</a></code> </p>
</td>
<td><p>Groundwater ubiquity score based on Gustafson (1989)</p></td>
</tr>
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<h2>Contents</h2>
<ul class="nav nav-pills nav-stacked">
<li><a href="#section-general-utility-functions">General utility functions</a></li>
<li><a href="#section-predicted-environmental-concentrations-in-soil">Predicted environmental concentrations in soil</a></li>
<li><a href="#section-predicted-environmental-concentrations-in-groundwater">Predicted environmental concentrations in groundwater</a></li>
<li><a href="#section-predicted-environmental-concentrations-in-surface-water">Predicted environmental concentrations in surface water</a></li>
<li><a href="#section-classifications-and-indicators">Classifications and indicators</a></li>
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