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authorJohannes Ranke <jranke@uni-bremen.de>2017-03-24 15:22:07 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2017-03-24 15:22:07 +0100
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+ <h1>Dose-Response data for TBT and Zink Pyrithione in IPC-81 cells</h1>
+ </div>
+
+
+ <p>This data set shows the response of the rat leukaemic cell line IPC-81 to
+ dilution series of tributyltin chloride (TBT) and Zink Pyrithione as retrieved
+ from the "cytotox" database of the UFT Department of Bioorganic Chemistry on
+ February 25, 2004</p>
+
+
+ <pre><span class='fu'>data</span>(<span class='no'>antifoul</span>)</pre>
+
+ <h2 class="hasAnchor" id="format"><a class="anchor" href="#format"></a>Format</h2>
+
+ <p>A dataframe containing 135 and 81 data points for concentrations and responses
+ for TBT and Zink Pyrithione, respectively. Some additional columns from the
+ database are also present.</p>
+
+ <h2 class="hasAnchor" id="source"><a class="anchor" href="#source"></a>Source</h2>
+
+ <p><a href = 'http://www.uft.uni-bremen.de/chemie'>http://www.uft.uni-bremen.de/chemie</a></p>
+
+
+ <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
+ <pre class="examples"><div class='input'><span class='no'>rantifoul.ED50</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='drfit.html'>drfit</a></span>(<span class='no'>antifoul</span>,
+ <span class='kw'>linlogit</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>, <span class='kw'>logit</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>, <span class='kw'>weibull</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>,
+ <span class='kw'>chooseone</span> <span class='kw'>=</span> <span class='fl'>FALSE</span>,
+ <span class='kw'>showED50</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>, <span class='kw'>EDx</span> <span class='kw'>=</span> <span class='fu'>c</span>(<span class='fl'>10</span>))</div><div class='output co'>#&gt; <span class='message'></span>
+#&gt; <span class='message'>TBT: Fitting data...</span></div><div class='output co'>#&gt; <span class='message'>Waiting for profiling to be done...</span></div><div class='output co'>#&gt; <span class='message'>Waiting for profiling to be done...</span></div><div class='output co'>#&gt; <span class='message'>Waiting for profiling to be done...</span></div><div class='output co'>#&gt; <span class='message'></span>
+#&gt; <span class='message'>Zn Pyrithion: Fitting data...</span></div><div class='output co'>#&gt; <span class='message'>Waiting for profiling to be done...</span></div><div class='output co'>#&gt; <span class='message'>Waiting for profiling to be done...</span></div><div class='output co'>#&gt; <span class='message'>Waiting for profiling to be done...</span></div><div class='input'><span class='fu'>print</span>(<span class='no'>rantifoul.ED50</span>, <span class='kw'>digits</span> <span class='kw'>=</span> <span class='fl'>5</span>)</div><div class='output co'>#&gt; Substance ndl n lld lhd mtype logED50 2.5% 97.5%
+#&gt; 1 TBT 38 135 -2.7093 2.3979 linlogit -0.15809 -0.26021 -0.050475
+#&gt; 2 TBT 38 135 -2.7093 2.3979 probit -0.16436 -0.26504 -0.056498
+#&gt; 3 TBT 38 135 -2.7093 2.3979 logit -0.16012 -0.26116 -0.052591
+#&gt; 4 TBT 38 135 -2.7093 2.3979 weibull -0.11507 NA NA
+#&gt; 5 Zn Pyrithion 27 81 -2.1072 2.0000 linlogit -0.41329 -0.52932 -0.299799
+#&gt; 6 Zn Pyrithion 27 81 -2.1072 2.0000 probit -0.39792 -0.50783 -0.291563
+#&gt; 7 Zn Pyrithion 27 81 -2.1072 2.0000 logit -0.40035 -0.51049 -0.293501
+#&gt; 8 Zn Pyrithion 27 81 -2.1072 2.0000 weibull -0.38795 NA NA
+#&gt; unit sigma a b c ED50 ED50 2.5% ED50 97.5%
+#&gt; 1 microM 0.19264 -0.15809 1.04065 -0.024165 0.69487 0.54927 0.89028
+#&gt; 2 microM 0.19286 -0.16436 0.67637 NA 0.68493 0.54320 0.87801
+#&gt; 3 microM 0.19199 -0.16012 0.41358 NA 0.69164 0.54808 0.88595
+#&gt; 4 microM 0.18810 0.63743 1.28891 NA 0.76724 NA NA
+#&gt; 5 microM 0.22878 -0.41329 1.74249 0.610810 0.38611 0.29558 0.50142
+#&gt; 6 microM 0.22866 -0.39792 0.41696 NA 0.40002 0.31058 0.51102
+#&gt; 7 microM 0.22802 -0.40035 0.25395 NA 0.39779 0.30868 0.50874
+#&gt; 8 microM 0.23008 0.47647 2.51561 NA 0.40931 NA NA
+#&gt; EDx10
+#&gt; 1 0.085214
+#&gt; 2 0.093077
+#&gt; 3 0.085340
+#&gt; 4 0.053392
+#&gt; 5 0.120232
+#&gt; 6 0.116872
+#&gt; 7 0.110068
+#&gt; 8 0.121166</div><div class='input'>
+<span class='no'>rantifoul.drc</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='drcfit.html'>drcfit</a></span>(<span class='no'>antifoul</span>,
+ <span class='kw'>linlogit</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>, <span class='kw'>logit</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>, <span class='kw'>weibull</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>,
+ <span class='kw'>chooseone</span> <span class='kw'>=</span> <span class='fl'>FALSE</span>,
+ <span class='kw'>showED50</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>, <span class='kw'>EDx</span> <span class='kw'>=</span> <span class='fu'>c</span>(<span class='fl'>10</span>))</div><div class='output co'>#&gt; <span class='message'></span>
+#&gt; <span class='message'>TBT: Fitting data...</span></div><div class='output co'>#&gt; <span class='error'>Error in ED50["1:50", "Lower"]: Indizierung außerhalb der Grenzen</span></div><div class='input'><span class='fu'>print</span>(<span class='no'>rantifoul.drc</span>, <span class='kw'>digits</span> <span class='kw'>=</span> <span class='fl'>5</span>)</div><div class='output co'>#&gt; <span class='error'>Error in print(rantifoul.drc, digits = 5): Objekt 'rantifoul.drc' nicht gefunden</span></div></pre>
+ </div>
+ <div class="col-md-3 hidden-xs hidden-sm" id="sidebar">
+ <h2>Contents</h2>
+ <ul class="nav nav-pills nav-stacked">
+
+ <li><a href="#format">Format</a></li>
+
+ <li><a href="#source">Source</a></li>
+
+ <li><a href="#examples">Examples</a></li>
+ </ul>
+
+ </div>
+</div>
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+ <div class="copyright">
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